Nuno Alberto Paulino da Fonseca


AuthID: R-000-DK8

Confirmed Publications: 119



41
TITLE: Inferences on specificity recognition at the Malusxdomestica gametophytic self-incompatibility system  Full Text
AUTHORS: Maria I Pratas; Bruno Aguiar ; Jorge Vieira ; Vanessa Nunes; Vanessa Teixeira; Nuno A Fonseca ; Amy Iezzoni; Steve van Nocker; Cristina P Vieira ;
PUBLISHED: 2018, SOURCE: SCIENTIFIC REPORTS, VOLUME: 8, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 22
IN MY: ORCID
42
TITLE: Transcription factor activities enhance markers of drug sensitivity in cancer
AUTHORS: Garcia Alonso, L; Iorio, F; Matchan, A; Fonseca, N ; Jaaks, P; Peat, G; Pignatelli, M; Falcone, F; Benes, CH; Dunham, I; Bignell, G; McDade, SS; Garnett, MJ; Saez Rodriguez, J;
PUBLISHED: 2018, SOURCE: Cancer Research, VOLUME: 78, ISSUE: 3
INDEXED IN: Scopus CrossRef: 148
IN MY: ORCID
43
TITLE: Tumors induce de novo steroid biosynthesis in T cells to evade immunity
AUTHORS: Bidesh Mahata; Jhuma Pramanik; Louise van der Weyden; Krzysztof Polanski; Gozde Kar; Angela Riedel; Xi Chen; Nuno A Fonseca ; Kousik Kundu; Lia S Campos; Edward Ryder; Graham Duddy; Izabela Walczak; Klaus Okkenhaug; David J Adams; Jacqueline D Shields; Sarah A Teichmann;
PUBLISHED: 2018
INDEXED IN: CrossRef: 1
IN MY: ORCID
44
TITLE: A Pan-Cancer Transcriptome Analysis Reveals Pervasive Regulation through Tumor-Associated Alternative Promoters
AUTHORS: Deniz Demircioğlu; Martin Kindermans; Tannistha Nandi; Engin Cukuroglu; Claudia Calabrese; Nuno A Fonseca ; Andre Kahles; Kjong Lehmann; Oliver Stegle; Alvis Brazma; Angela N Brooks; Gunnar Rätsch; Patrick Tan; Jonathan Göke;
PUBLISHED: 2017
INDEXED IN: CrossRef: 4
IN MY: ORCID
45
TITLE: Assessing the Gene Regulatory Landscape in 1,188 Human Tumors
AUTHORS: Claudia Calabrese; Kjong-Van Lehmann; Lara Urban; Fenglin Liu; Serap Erkek; Nuno Fonseca ; Andre Kahles; Leena Helena Kilpinen-Barrett; Julia Markowski; Sebastian Waszak; Jan Korbel; Zemin Zhang; Alvis Brazma; Gunnar Raetsch; Roland Schwarz; Oliver Stegle; PCAWG-3, ;
PUBLISHED: 2017
INDEXED IN: CrossRef: 5
IN MY: ORCID
46
TITLE: Comprehensive genome and transcriptome analysis reveals genetic basis for gene fusions in cancer
AUTHORS: Nuno A Fonseca ; Yao He; Liliana Greger; Alvis Brazma; Zemin Zhang; - PCAWG-3, ;
PUBLISHED: 2017
INDEXED IN: CrossRef: 2
IN MY: ORCID
47
TITLE: Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes
AUTHORS: Esther Rheinbay; Morten Muhlig Nielsen; Federico Abascal; Grace Tiao; Henrik Hornshøj; Julian M Hess; Randi Istrup Pedersen; Lars Feuerbach; Radhakrishnan Sabarinathan; Tobias Madsen; Jaegil Kim; Loris Mularoni; Shimin Shuai; Andrés Lanzós; Carl Herrmann; Yosef E Maruvka; Ciyue Shen; Samirkumar B Amin; Johanna Bertl; Priyanka Dhingra; Klev Diamanti; Abel Gonzalez-Perez; Qianyun Guo; Nicholas J Haradhvala; Keren Isaev; Malene Juul; Jan Komorowski; Sushant Kumar; Donghoon Lee; Lucas Lochovsky; Eric Minwei Liu; Oriol Pich; David Tamborero; Husen M Umer; Liis Uusküla-Reimand; Claes Wadelius; Lina Wadi; Jing Zhang; Keith A Boroevich; Joana Carlevaro-Fita; Dimple Chakravarty; Calvin W.Y Chan; Nuno A Fonseca ; Mark P Hamilton; Chen Hong; Andre Kahles; Youngwook Kim; Kjong-Van Lehmann; Todd A Johnson; Abdullah Kahraman; Keunchil Park; Gordon Saksena; Lina Sieverling; Nicholas A Sinnott-Armstrong; Peter J Campbell; Asger Hobolth; Manolis Kellis; Michael S Lawrence; Ben Raphael; Mark A Rubin; Chris Sander; Lincoln Stein; Josh Stuart; Tatsuhiko Tsunoda; David A Wheeler; Rory Johnson; Jüri Reimand; Mark B Gerstein; Ekta Khurana; Núria López-Bigas; Iñigo Martincorena; Jakob Skou Pedersen; Gad Getz; ...More
PUBLISHED: 2017
INDEXED IN: CrossRef: 14
IN MY: ORCID
48
TITLE: Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types
AUTHORS: Claudia Calabrese; Natalie R Davidson; Nuno A Fonseca ; Yao He; André Kahles; Kjong-Van Lehmann; Fenglin Liu; Yuichi Shiraishi; Cameron M Soulette; Lara Urban; Deniz Demircioğlu; Liliana Greger; Siliang Li; Dongbing Liu; Marc D Perry; Linda Xiang; Fan Zhang; Junjun Zhang; Peter Bailey; Serap Erkek; Katherine A Hoadley; Yong Hou; Helena Kilpinen; Jan O Korbel; Maximillian G Marin; Julia Markowski; Tannistha Nandi; Qiang Pan-Hammarström; Chandra Sekhar Pedamallu; Reiner Siebert; Stefan G Stark; Hong Su; Patrick Tan; Sebastian M Waszak; Christina Yung; Shida Zhu; Philip Awadalla; Chad J Creighton; Matthew Meyerson; B.F Francis Ouellette; Kui Wu; Huangming Yang; Alvis Brazma; Angela N Brooks; Jonathan Göke; Gunnar Rätsch; Roland F Schwarz; Oliver Stegle; Zemin Zhang; ...More
PUBLISHED: 2017
INDEXED IN: CrossRef: 11
IN MY: ORCID
49
TITLE: Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments
AUTHORS: Christina K Yung; Brian D O’Connor; Sergei Yakneen; Junjun Zhang; Kyle Ellrott; Kortine Kleinheinz; Naoki Miyoshi; Keiran M Raine; Romina Royo; Gordon B Saksena; Matthias Schlesner; Solomon I Shorser; Miguel Vazquez; Joachim Weischenfeldt; Denis Yuen; Adam P Butler; Brandi N Davis-Dusenbery; Roland Eils; Vincent Ferretti; Robert L Grossman; Olivier Harismendy; Youngwook Kim; Hidewaki Nakagawa; Steven J Newhouse; David Torrents; Lincoln D Stein; Javier Bartolomé Rodriguez; Keith A Boroevich; Rich Boyce; Angela N Brooks; Alex Buchanan; Ivo Buchhalter; Niall J Byrne; Andy Cafferkey; Peter J Campbell; Zhaohong Chen; Sunghoon Cho; Wan Choi; Peter Clapham; Francisco M De La Vega; Jonas Demeulemeester; Michelle T Dow; Lewis J Dursi; Juergen Eils; Claudiu Farcas; Francesco Favero; Nodirjon Fayzullaev; Paul Flicek; Nuno A Fonseca ; Josep L.l Gelpi; Gad Getz; Bob Gibson; Michael C Heinold; Julian M Hess; Oliver Hofmann; Jongwhi H Hong; Thomas J Hudson; Daniel Huebschmann; Barbara Hutter; Carolyn M Hutter; Seiya Imoto; Sinisa Ivkovic; Seung-Hyup Jeon; Wei Jiao; Jongsun Jung; Rolf Kabbe; Andre Kahles; Jules Kerssemakers; Hyunghwan Kim; Hyung-Lae Kim; Jihoon Kim; Jan O Korbel; Michael Koscher; Antonios Koures; Milena Kovacevic; Chris Lawerenz; Ignaty Leshchiner; Dimitri G Livitz; George L Mihaiescu; Sanja Mijalkovic; Ana Mijalkovic Lazic; Satoru Miyano; Hardeep K Nahal; Mia Nastic; Jonathan Nicholson; David Ocana; Kazuhiro Ohi; Lucila Ohno-Machado; Larsson Omberg; B.F Francis Ouellette; Nagarajan Paramasivam; Marc D Perry; Todd D Pihl; Manuel Prinz; Montserrat Puiggròs; Petar Radovic; Esther Rheinbay; Mara W Rosenberg; Charles Short; Heidi J Sofia; Jonathan Spring; Adam J Struck; Grace Tiao; Nebojsa Tijanic; Peter Van Loo; David Vicente; Jeremiah A Wala; Zhining Wang; Johannes Werner; Ashley Williams; Youngchoon Woo; Adam J Wright; Qian Xiang; ...More
PUBLISHED: 2017
INDEXED IN: CrossRef: 15
IN MY: ORCID
50
TITLE: Online resources for PCAWG data exploration, visualization, and discovery
AUTHORS: Mary Goldman; Junjun Zhang; Nuno A Fonseca ; Qian Xiang; Brian Craft; Elena Piñeiro-Yáñez; Brian O'Connor; Wojciech Bazant; Elisabet Barrera; Alfonso Muñoz; Robert Petryszak; Anja Füllgrabe; Fatima Al-Shahrour; Maria Keays; David Haussler; John Weinstein; Wolfgang Huber; Alfonso Valencia; Irene Papatheodorou; Jingchun Zhu; Vincent Ferreti; Miguel Vazquez; PCAWG-12 Working Group, ; PCAWG Network, ; ...More
PUBLISHED: 2017
INDEXED IN: CrossRef: 3
IN MY: ORCID
Page 5 of 12. Total results: 119.

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