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Pedro Gabriel Dias Ferreira
AuthID:
R-000-ERJ
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Article (52)
Proceedings Paper (11)
Book Chapter (4)
Correction (3)
Editorial Material (2)
Letter (1)
Book (1)
Phd Thesis (1)
Unpublished (1)
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Order:
Year Dsc
Year Asc
Cit. WOS Dsc
IF WOS Dsc
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IF Scopus Dsc
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Results:
10
20
30
40
50
Confirmed Publications: 76
21
TITLE:
Transcriptomic signatures across human tissues identify functional rare genetic variation
AUTHORS:
Aguet, F; Barbeira, AN; Bonazzola, R; Brown, A; Castel, SE; Jo, B; Kasela, S; Kim Hellmuth, S; Liang, Y; Oliva, M; Flynn, ED; Parsana, P; Fresard, L; Gamazon, ER; Hamel, AR; He, Y; Hormozdiari, F; Mohammadi, P; Muñoz Aguirre, M; Park, Y;
Saha, A;
Segrè, AV;
Strober, BJ;
Wen, X;
Wucher, V;
Ardlie, KG;
Battle, A;
Brown, CD;
Cox, N;
Das, S;
Dermitzakis, ET;
Engelhardt, BE;
Garrido Martín, D;
Gay, NR;
Getz, GA;
Guigó, R;
Handsaker, RE;
Hoffman, PJ;
Im, HK;
Kashin, S;
Kwong, A;
Lappalainen, T;
Li, X;
MacArthur, DG;
Montgomery, SB;
Rouhana, JM;
Stephens, M;
Stranger, BE;
Todres, E;
Viñuela, A;
Wang, G;
Zou, Y;
Anand, S;
Gabriel, S;
Graubert, A;
Hadley, K;
Huang, KH;
Meier, SR;
Nedzel, JL;
Nguyen, DT;
Balliu, B;
Conrad, DF;
Cotter, DJ;
deGoede, OM;
Einson, J;
Eskin, E;
Eulalio, TY;
Ferraro, NM;
Gloudemans, MJ;
Hou, L;
Kellis, M;
Li, X;
Mangul, S;
Nachun, DC;
Nobel, AB;
Park, Y;
Rao, AS;
Reverter, F;
Sabatti, C;
Skol, AD;
Teran, NA;
Wright, F;
Ferreira, PG
;
Li, G;
Melé, M;
Yeger Lotem, E;
Barcus, ME;
Bradbury, D;
Krubit, T;
McLean, JA;
Qi, L;
Robinson, K;
Roche, NV;
Smith, AM;
Sobin, L;
Tabor, DE;
Undale, A;
Bridge, J;
Brigham, LE;
Foster, BA;
Gillard, BM;
Hasz, R;
Hunter, M;
Johns, C;
Johnson, M;
Karasik, E;
Kopen, G;
Leinweber, WF;
McDonald, A;
Moser, MT;
Myer, K;
Ramsey, KD;
Roe, B;
Shad, S;
Thomas, JA;
Walters, G;
Washington, M;
Wheeler, J;
Jewell, SD;
Rohrer, DC;
Valley, DR;
Davis, DA;
Mash, DC;
Branton, PA;
Barker, LK;
Gardiner, HM;
Mosavel, M;
Siminoff, LA;
Flicek, P;
Haeussler, M;
Juettemann, T;
Kent, WJ;
Lee, CM;
Powell, CC;
Rosenbloom, KR;
Ruffier, M;
Sheppard, D;
Taylor, K;
Trevanion, SJ;
Zerbino, DR;
Abell, NS;
Akey, J;
Chen, L;
Demanelis, K;
Doherty, JA;
Feinberg, AP;
Hansen, KD;
Hickey, PF;
Jasmine, F;
Jiang, L;
Kaul, R;
Kibriya, MG;
Li, JB;
Li, Q;
Lin, S;
Linder, SE;
Pierce, BL;
Rizzardi, LF;
Smith, KS;
Snyder, M;
Stamatoyannopoulos, J;
Tang, H;
Wang, M;
Carithers, LJ;
Guan, P;
Koester, SE;
Little, AR;
Moore, HM;
Nierras, CR;
Rao, AK;
Vaught, JB;
Volpi, S;
...More
PUBLISHED:
2020
,
SOURCE:
Science,
VOLUME:
369,
ISSUE:
6509
INDEXED IN:
Scopus
CrossRef
:
78
22
TITLE:
Bioinformatics algorithms: Design and implementation in python
AUTHORS:
Rocha, M
;
Ferreira, PG
;
PUBLISHED:
2018
,
SOURCE:
Bioinformatics Algorithms: Design and Implementation in Python
INDEXED IN:
Scopus
23
TITLE:
Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics
AUTHORS:
Barbeira, AN; Dickinson, SP; Bonazzola, R; Zheng, J; Wheeler, HE; Torres, JM; Torstenson, ES; Shah, KP; Garcia, T; Edwards, TL; Stahl, EA; Huckins, LM; Aguet, F; Ardlie, KG; Cummings, BB; Gelfand, ET; Getz, G; Hadley, K; Handsaker, RE; Huang, KH;
Kashin, S;
Karczewski, KJ;
Lek, M;
Li, X;
MacArthur, DG;
Nedzel, JL;
Nguyen, DT;
Noble, MS;
Segrè, AV;
Trowbridge, CA;
Tukiainen, T;
Abell, NS;
Balliu, B;
Barshir, R;
Basha, O;
Battle, A;
Bogu, GK;
Brown, A;
Brown, CD;
Castel, SE;
Chen, LS;
Chiang, C;
Conrad, DF;
Damani, FN;
Davis, JR;
Delaneau, O;
Dermitzakis, ET;
Engelhardt, BE;
Eskin, E;
Ferreira, PG
;
Frésard, L;
Gamazon, ER;
Garrido Martín, D;
Gewirtz, ADH;
Gliner, G;
Gloudemans, MJ;
Guigo, R;
Hall, IM;
Han, B;
He, Y;
Hormozdiari, F;
Howald, C;
Jo, B;
Kang, EY;
Kim, Y;
Kim Hellmuth, S;
Lappalainen, T;
Li, G;
Li, X;
Liu, B;
Mangul, S;
McCarthy, MI;
McDowell, IC;
Mohammadi, P;
Monlong, J;
Montgomery, SB;
Muñoz Aguirre, M;
Ndungu, AW;
Nobel, AB;
Oliva, M;
Ongen, H;
Palowitch, JJ;
Panousis, N;
Papasaikas, P;
Park, Y;
Parsana, P;
Payne, AJ;
Peterson, CB;
Quan, J;
Reverter, F;
Sabatti, C;
Saha, A;
Sammeth, M;
Scott, AJ;
Shabalin, AA;
Sodaei, R;
Stephens, M;
Stranger, BE;
Strober, BJ;
Sul, JH;
Tsang, EK;
Urbut, S;
Van De Bunt, M;
Wang, G;
Wen, X;
Wright, FA;
Xi, HS;
Yeger Lotem, E;
Zappala, Z;
Zaugg, JB;
Zhou, YH;
Akey, JM;
Bates, D;
Chan, J;
Claussnitzer, M;
Demanelis, K;
Diegel, M;
Doherty, JA;
Feinberg, AP;
Fernando, MS;
Halow, J;
Hansen, KD;
Haugen, E;
Hickey, PF;
Hou, L;
Jasmine, F;
Jian, R;
Jiang, L;
Johnson, A;
Kaul, R;
Kellis, M;
Kibriya, MG;
Lee, K;
Li, JB;
Li, Q;
Lin, J;
Lin, S;
Linder, S;
Linke, C;
Liu, Y;
Maurano, MT;
Molinie, B;
Nelson, J;
Neri, FJ;
Park, Y;
Pierce, BL;
Rinaldi, NJ;
Rizzardi, LF;
Sandstrom, R;
Skol, A;
Smith, KS;
Snyder, MP;
Stamatoyannopoulos, J;
Tang, H;
Wang, L;
Wang, M;
Van Wittenberghe, N;
Wu, F;
Zhang, R;
Nierras, CR;
Branton, PA;
Carithers, LJ;
Guan, P;
Moore, HM;
Rao, A;
Vaught, JB;
Gould, SE;
Lockart, NC;
Martin, C;
Struewing, JP;
Volpi, S;
Addington, AM;
Koester, SE;
Little, AR;
Brigham, LE;
Hasz, R;
Hunter, M;
Johns, C;
Johnson, M;
Kopen, G;
Leinweber, WF;
Lonsdale, JT;
McDonald, A;
Mestichelli, B;
Myer, K;
Roe, B;
Salvatore, M;
Shad, S;
Thomas, JA;
Walters, G;
Washington, M;
Wheeler, J;
Bridge, J;
Foster, BA;
Gillard, BM;
Karasik, E;
Kumar, R;
Miklos, M;
Moser, MT;
Jewell, SD;
Montroy, RG;
Rohrer, DC;
Valley, DR;
Davis, DA;
Mash, DC;
Undale, AH;
Smith, AM;
Tabor, DE;
Roche, NV;
McLean, JA;
Vatanian, N;
Robinson, KL;
Sobin, L;
Barcus, ME;
Valentino, KM;
Qi, L;
Hunter, S;
Hariharan, P;
Singh, S;
Um, KS;
Matose, T;
Tomaszewski, MM;
Barker, LK;
Mosavel, M;
Siminoff, LA;
Traino, HM;
Flicek, P;
Juettemann, T;
Ruffier, M;
Sheppard, D;
Taylor, K;
Trevanion, SJ;
Zerbino, DR;
Craft, B;
Goldman, M;
Haeussler, M;
Kent, WJ;
Lee, CM;
Paten, B;
Rosenbloom, KR;
Vivian, J;
Zhu, J;
Nicolae, DL;
Cox, NJ;
Im, HK;
...More
PUBLISHED:
2018
,
SOURCE:
Nature Communications,
VOLUME:
9,
ISSUE:
1
INDEXED IN:
Scopus
24
TITLE:
The effects of death and post-mortem cold ischemia on human tissue transcriptomes
AUTHORS:
Pedro G Ferreira
; Manuel Munoz Aguirre; Ferran Reverter; Caio P S Sa Godinho; Abel Sousa; Alicia Amadoz;
Reza Sodaei
; Marta R Hidalgo;
Dmitri Pervouchine
; Jose Carbonell Caballero;
Ramil Nurtdinov
; Alessandra Breschi;
Raziel Amador
;
Patricia Oliveira
; Cankut Cubuk; Joao Curado;
Francois Aguet
; Carla Oliveira; Joaquin Dopazo;
Michael Sammeth
;
Kristin G Ardlie;
Roderic Guigo
;
...More
PUBLISHED:
2018
,
SOURCE:
NATURE COMMUNICATIONS,
VOLUME:
9,
ISSUE:
1
INDEXED IN:
Scopus
WOS
CrossRef
:
181
IN MY:
ORCID
25
TITLE:
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
AUTHORS:
Ashis Saha; Yungil Kim; Ariel D H Gewirtz; Brian Jo; Chuan Gao; Ian C McDowell; Barbara E Engelhardt; Alexis Battle; François Aguet; Kristin G Ardlie; Beryl B Cummings; Ellen T Gelfand; Gad Getz; Kane Hadley; Robert E Handsaker; Katherine H Huang; Seva Kashin; Konrad J Karczewski; Monkol Lek; Xiao Li;
Daniel G MacArthur;
Jared L Nedzel;
Duyen T Nguyen;
Michael S Noble;
Ayellet V Segrè;
Casandra A Trowbridge;
Taru Tukiainen;
Nathan S Abell;
Brunilda Balliu;
Ruth Barshir;
Omer Basha;
Alexis Battle;
Gireesh K Bogu;
Andrew Brown;
Christopher D Brown;
Stephane E Castel;
Lin S Chen;
Colby Chiang;
Donald F Conrad;
Nancy J Cox;
Farhan N Damani;
Joe R Davis;
Olivier Delaneau;
Emmanouil T Dermitzakis;
Barbara E Engelhardt;
Eleazar Eskin;
Pedro G Ferreira
;
Laure Frésard;
Eric R Gamazon;
Diego Garrido Martín;
Genna Gliner;
Michael J Gloudemans;
Roderic Guigo;
Ira M Hall;
Buhm Han;
Yuan He;
Farhad Hormozdiari;
Cedric Howald;
Hae Kyung Im;
Eun Yong Kang;
Sarah Kim Hellmuth;
Tuuli Lappalainen;
Gen Li;
Xin Li;
Boxiang Liu;
Serghei Mangul;
Mark I McCarthy;
Pejman Mohammadi;
Jean Monlong;
Stephen B Montgomery;
Manuel Muñoz Aguirre;
Anne W Ndungu;
Dan L Nicolae;
Andrew B Nobel;
Meritxell Oliva;
Halit Ongen;
John J Palowitch;
Nikolaos Panousis;
Panagiotis Papasaikas;
Yo Son Park;
Princy Parsana;
Anthony J Payne;
Christine B Peterson;
Jie Quan;
Ferran Reverter;
Chiara Sabatti;
Michael Sammeth;
Alexandra J Scott;
Andrey A Shabalin;
Reza Sodaei;
Matthew Stephens;
Barbara E Stranger;
Benjamin J Strober;
Jae Hoon Sul;
Emily K Tsang;
Sarah Urbut;
Martijn van de Bunt;
Gao Wang;
Xiaoquan Wen;
Fred A Wright;
...More
PUBLISHED:
2017
,
SOURCE:
Genome Research,
VOLUME:
27,
ISSUE:
11
INDEXED IN:
Scopus
26
TITLE:
Dynamic landscape and regulation of RNA editing in mammals
Full Text
AUTHORS:
Meng How Tan; Qin Li; Raghuvaran Shanmugam; Robert Piskol; Jennefer Kohler; Amy N Young; Kaiwen Ivy Liu; Rui Zhang; Gokul Ramaswami; Kentaro Ariyoshi; Ankita Gupte; Liam P Keegan; Cyril X George; Avinash Ramu; Ni Huang; Elizabeth A Pollina; Dena S Leeman; Alessandra Rustighi; Sharon P S Goh; François Aguet;
Kristin G Ardlie;
Beryl B Cummings;
Ellen T Gelfand;
Gad Getz;
Kane Hadley;
Robert E Handsaker;
Katherine H Huang;
Seva Kashin;
Konrad J Karczewski;
Monkol Lek;
Xiao Li;
Daniel G MacArthur;
Jared L Nedzel;
Duyen T Nguyen;
Michael S Noble;
Ayellet V Segrè;
Casandra A Trowbridge;
Taru Tukiainen;
Nathan S Abell;
Brunilda Balliu;
Ruth Barshir;
Omer Basha;
Alexis Battle;
Gireesh K Bogu;
Andrew Brown;
Christopher D Brown;
Stephane E Castel;
Lin S Chen;
Colby Chiang;
Donald F Conrad;
Nancy J Cox;
Farhan N Damani;
Joe R Davis;
Olivier Delaneau;
Emmanouil T Dermitzakis;
Barbara E Engelhardt;
Eleazar Eskin;
Pedro G Ferreira
;
Laure Frésard;
Eric R Gamazon;
Diego Garrido-Martín;
Ariel D H Gewirtz;
Genna Gliner;
Michael J Gloudemans;
Roderic Guigo;
Ira M Hall;
Buhm Han;
Yuan He;
Farhad Hormozdiari;
Cedric Howald;
Hae Kyung Im;
Brian Jo;
Eun Yong Kang;
Yungil Kim;
Sarah Kim-Hellmuth;
Tuuli Lappalainen;
Gen Li;
Xin Li;
Boxiang Liu;
Serghei Mangul;
Mark I McCarthy;
Ian C McDowell;
Pejman Mohammadi;
Jean Monlong;
Stephen B Montgomery;
Manuel Muñoz-Aguirre;
Anne W Ndungu;
Dan L Nicolae;
Andrew B Nobel;
Meritxell Oliva;
Halit Ongen;
John J Palowitch;
Nikolaos Panousis;
Panagiotis Papasaikas;
YoSon Park;
Princy Parsana;
Anthony J Payne;
Christine B Peterson;
Jie Quan;
Ferran Reverter;
Chiara Sabatti;
Ashis Saha;
Michael Sammeth;
Alexandra J Scott;
Andrey A Shabalin;
Reza Sodaei;
Matthew Stephens;
Barbara E Stranger;
Benjamin J Strober;
Jae Hoon Sul;
Emily K Tsang;
Sarah Urbut;
Martijn van de Bunt;
Gao Wang;
Xiaoquan Wen;
Fred A Wright;
Hualin S Xi;
Esti Yeger-Lotem;
Zachary Zappala;
Judith B Zaugg;
Yi-Hui Zhou;
Joshua M Akey;
Daniel Bates;
Joanne Chan;
Lin S Chen;
Melina Claussnitzer;
Kathryn Demanelis;
Morgan Diegel;
Jennifer A Doherty;
Andrew P Feinberg;
Marian S Fernando;
Jessica Halow;
Kasper D Hansen;
Eric Haugen;
Peter F Hickey;
Lei Hou;
Farzana Jasmine;
Ruiqi Jian;
Lihua Jiang;
Audra Johnson;
Rajinder Kaul;
Manolis Kellis;
Muhammad G Kibriya;
Kristen Lee;
Jin Billy Li;
Qin Li;
Xiao Li;
Jessica Lin;
Shin Lin;
Sandra Linder;
Caroline Linke;
Yaping Liu;
Matthew T Maurano;
Benoit Molinie;
Stephen B Montgomery;
Jemma Nelson;
Fidencio J Neri;
Meritxell Oliva;
Yongjin Park;
Brandon L Pierce;
Nicola J Rinaldi;
Lindsay F Rizzardi;
Richard Sandstrom;
Andrew Skol;
Kevin S Smith;
Michael P Snyder;
John Stamatoyannopoulos;
Barbara E Stranger;
Hua Tang;
Emily K Tsang;
Li Wang;
Meng Wang;
Nicholas Van Wittenberghe;
Fan Wu;
Rui Zhang;
Concepcion R Nierras;
Philip A Branton;
Latarsha J Carithers;
Ping Guan;
Helen M Moore;
Abhi Rao;
Jimmie B Vaught;
Sarah E Gould;
Nicole C Lockart;
Casey Martin;
Jeffery P Struewing;
Simona Volpi;
Anjene M Addington;
Susan E Koester;
Roger R Little;
Lori E Brigham;
Richard Hasz;
Marcus Hunter;
Christopher Johns;
Mark Johnson;
Gene Kopen;
William F Leinweber;
John T Lonsdale;
Alisa McDonald;
Bernadette Mestichelli;
Kevin Myer;
Brian Roe;
Michael Salvatore;
Saboor Shad;
Jeffrey A Thomas;
Gary Walters;
Michael Washington;
Joseph Wheeler;
Jason Bridge;
Barbara A Foster;
Bryan M Gillard;
Ellen Karasik;
Rachna Kumar;
Mark Miklos;
Michael T Moser;
Scott D Jewell;
Robert G Montroy;
Daniel C Rohrer;
Dana R Valley;
David A Davis;
Deborah C Mash;
Anita H Undale;
Anna M Smith;
David E Tabor;
Nancy V Roche;
Jeffrey A McLean;
Negin Vatanian;
Karna L Robinson;
Leslie Sobin;
Mary E Barcus;
Kimberly M Valentino;
Liqun Qi;
Steven Hunter;
Pushpa Hariharan;
Shilpi Singh;
Ki Sung Um;
Takunda Matose;
Maria M Tomaszewski;
Laura K Barker;
Maghboeba Mosavel;
Laura A Siminoff;
Heather M Traino;
Paul Flicek;
Thomas Juettemann;
Magali Ruffier;
Dan Sheppard;
Kieron Taylor;
Stephen J Trevanion;
Daniel R Zerbino;
Brian Craft;
Mary Goldman;
Maximilian Haeussler;
James J Kent;
Christopher M Lee;
Benedict Paten;
Kate R Rosenbloom;
John Vivian;
Jingchun Zhu;
Ajay Chawla;
Giannino Del Sal;
Gary Peltz;
Anne Brunet;
Donald F Conrad;
Charles E Samuel;
Mary A O’Connell;
Carl R Walkley;
Kazuko Nishikura;
Jin Billy Li;
...More
PUBLISHED:
2017
,
SOURCE:
Nature,
VOLUME:
550,
ISSUE:
7675
INDEXED IN:
Scopus
CrossRef
:
439
IN MY:
ORCID
27
TITLE:
Genetic effects on gene expression across human tissues
Full Text
AUTHORS:
Francois Aguet; Andrew A Brown; Stephane E Castel; Joe R Davis; Yuan He; Brian Jo; Pejman Mohammadi; Yoson Park; Princy Parsana; Ayellet V Segre; Benjamin J Strober; Zachary Zappala; Beryl B Cummings; Ellen T Gelfand; Kane Hadley; Katherine H Huang; Monkol Lek; Xiao Li; Jared L Nedzel; Duyen Y Nguyen;
Michael S Noble;
Timothy J Sullivan;
Taru Tukiainen;
Daniel G MacArthur;
Gad Getz;
Nih Program Management;
Anjene Addington;
Ping Guan;
Susan Koester;
Roger R Little;
Nicole C Lockhart;
Helen M Moore;
Abhi Rao;
Jeffery P Struewing;
Simona Volpi;
Biospecimen Collection;
Lori E Brigham;
Richard Hasz;
Marcus Hunter;
Christopher Johns;
Mark Johnson;
Gene Kopen;
William F Leinweber;
John T Lonsdale;
Alisa McDonald;
Bernadette Mestichelli;
Kevin Myer;
Bryan Roe;
Michael Salvatore;
Saboor Shad;
Jeffrey A Thomas;
Gary Walters;
Michael Washington;
Joseph Wheeler;
Jason Bridge;
Barbara A Foster;
Bryan M Gillard;
Ellen Karasik;
Rachna Kumar;
Mark Miklos;
Michael T Moser;
Scott D Jewell;
Robert G Montroy;
Daniel C Rohrer;
Dana Valley;
Deborah C Mash;
David A Davis;
Leslie Sobin;
Mary E Barcus;
Philip A Branton;
Eqtl Manuscript Working Grp;
Nathan S Abell;
Brunilda Balliu;
Olivier Delaneau;
Laure Fresard;
Eric R Gamazon;
Diego Garrido Martin;
Ariel D H Gewirtz;
Genna Gliner;
Michael J Gloudemans;
Buhm Han;
Amy Z He;
Farhad Hormozdiari;
Xin Li;
Boxiang Liu;
Eun Yong Kang;
Ian C McDowell;
Halit Ongen;
John J Palowitch;
Christine B Peterson;
Gerald Quon;
Stephan Ripke;
Ashis Saha;
Andrey A Shabalin;
Tyler C Shimko;
Jae Hoon Sul;
Nicole A Teran;
Emily K Tsang;
Hailei Zhang;
Yi Hui Zhou;
Carlos D Bustamante;
Nancy J Cox;
Roderic Guigo;
Manolis Kellis;
Mark I McCarthy;
Donald F Conrad;
Eleazar Eskin;
Gen Li;
Andrew B Nobel;
Chiara Sabatti;
Barbara E Stranger;
Xiaoquan Wen;
Fred A Wright;
Kristin G Ardlie;
Emmanouil T Dermitzakis;
Tuuli Lappalainen;
Alexis Battle;
Christopher D Brown;
Barbara E Engelhardt;
Stephen B Montgomery;
Francois Aguet;
Kristin G Ardlie;
Beryl B Cummings;
Ellen T Gelfand;
Gad Getz;
Kane Hadley;
Robert E Handsaker;
Katherine H Huang;
Seva Kashin;
Konrad J Karczewski;
Monkol Lek;
Xiao Li;
Daniel G MacArthur;
Jared L Nedzel;
Duyen T Nguyen;
Michael S Noble;
Ayellet V Segre;
Casandra A Trowbridge;
Taru Tukiainen;
Nathan S Abell;
Brunilda Balliu;
Ruth Barshir;
Omer Basha;
Alexis Battle;
Gireesh K Bogu;
Andrew Brown;
Christopher D Brown;
Stephane E Castel;
Lin S Chen;
Colby Chiang;
Donald F Conrad;
Nancy J Cox;
Farhan N Damani;
Joe R Davis;
Olivier Delaneau;
Emmanouil T Dermitzakis;
Barbara E Engelhardt;
Eleazar Eskin;
Pedro G Ferreira
;
Laure Fresard;
Eric R Gamazon;
Diego Garrido Martin;
Ariel D H Gewirtz;
Genna Gliner;
Michael J Gloudemans;
Roderic Guigo;
Ira M Hall;
Buhm Han;
Yuan He;
Farhad Hormozdiari;
Cedric Howald;
Hae Kyung Im;
Brian Jo;
Eun Yong Kang;
Yungil Kim;
Sarah Kim Hellmuth;
Tuuli Lappalainen;
Gen Li;
Xin Li;
Boxiang Liu;
Serghei Mangul;
Mark I McCarthy;
Ian C McDowell;
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Jean Monlong;
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Manuel Munoz Aguirre;
Anne W Ndungu;
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Andrew B Nobel;
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Halit Ongen;
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Panagiotis Papasaikas;
Yoson Park;
Princy Parsana;
Anthony J Payne;
Christine B Peterson;
Jie Quan;
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Michael Sammeth;
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Andrey A Shabalin;
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Barbara E Stranger;
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Jae Hoon Sul;
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Manolis Kellis;
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Kevin S Smith;
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John Stamatoyannopoulos;
Barbara E Stranger;
Hua Tang;
Emily K Tsang;
Li Wang;
Meng Wang;
Nicholas Van Wittenberghe;
Fan Wu;
Rui Zhang;
Nih Common Fund;
Concepcion R Nierras;
Nih Nci;
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Latarsha J Carithers;
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Nicole C Lockart;
Casey Martin;
Jeffery P Struewing;
Simona Volpi;
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Anjene M Addington;
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Nih Nida;
Roger R Little;
Lori E Brigham;
Richard Hasz;
Marcus Hunter;
Christopher Johns;
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William F Leinweber;
John T Lonsdale;
Alisa McDonald;
Bernadette Mestichelli;
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Brian Roe;
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Gary Walters;
Michael Washington;
Joseph Wheeler;
Jason Bridge;
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Bryan M Gillard;
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David A Davis;
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David E Tabor;
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Kimberly M Valentino;
Liqun Qi;
Steven Hunter;
Pushpa Hariharan;
Shilpi Singh;
Ki Sung Um;
Takunda Matose;
Maria M Tomaszewski;
Elsi Study;
Laura K Barker;
Maghboeba Mosavel;
Laura A Siminoff;
Heather M Traino;
Paul Flicek;
Thomas Juettemann;
Magali Ruffier;
Dan Sheppard;
Kieron Taylor;
Stephen J Trevanion;
Daniel R Zerbino;
Brian Craft;
Mary Goldman;
Maximilian Haeussler;
James J Kent;
Christopher M Lee;
Benedict Paten;
Kate R Rosenbloom;
John Vivian;
Jingchun Zhu;
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PUBLISHED:
2017
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SOURCE:
NATURE,
VOLUME:
550,
ISSUE:
7675
INDEXED IN:
Scopus
WOS
CrossRef
:
3194
IN MY:
ORCID
28
TITLE:
Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
AUTHORS:
Fan Yang; Jiebiao Wang; Brandon L Pierce; Lin S Chen; François Aguet; Kristin G Ardlie; Beryl B Cummings; Ellen T Gelfand; Gad Getz; Kane Hadley; Robert E Handsaker; Katherine H Huang; Seva Kashin; Konrad J Karczewski; Monkol Lek; Xiao Li; Daniel G MacArthur; Jared L Nedzel; Duyen T Nguyen; Michael S Noble;
Ayellet V Segrè;
Casandra A Trowbridge;
Taru Tukiainen;
Nathan S Abell;
Brunilda Balliu;
Ruth Barshir;
Omer Basha;
Alexis Battle;
Gireesh K Bogu;
Andrew Brown;
Christopher D Brown;
Stephane E Castel;
Colby Chiang;
Donald F Conrad;
Nancy J Cox;
Farhan N Damani;
Joe R Davis;
Olivier Delaneau;
Emmanouil T Dermitzakis;
Barbara E Engelhardt;
Eleazar Eskin;
Pedro G Ferreira
;
Laure Frésard;
Eric R Gamazon;
Diego Garrido Martín;
Ariel D H Gewirtz;
Genna Gliner;
Michael J Gloudemans;
Roderic Guigo;
Ira M Hall;
Buhm Han;
Yuan He;
Farhad Hormozdiari;
Cedric Howald;
Hae Kyung Im;
Brian Jo;
Eun Yong Kang;
Yungil Kim;
Sarah Kim Hellmuth;
Tuuli Lappalainen;
Gen Li;
Xin Li;
Boxiang Liu;
Serghei Mangul;
Mark I McCarthy;
Ian C McDowell;
Pejman Mohammadi;
Jean Monlong;
Stephen B Montgomery;
Manuel Muñoz Aguirre;
Anne W Ndungu;
Dan L Nicolae;
Andrew B Nobel;
Meritxell Oliva;
Halit Ongen;
John J Palowitch;
Nikolaos Panousis;
Panagiotis Papasaikas;
Yo Son Park;
Princy Parsana;
Anthony J Payne;
Christine B Peterson;
Jie Quan;
Ferran Reverter;
Chiara Sabatti;
Ashis Saha;
Michael Sammeth;
Alexandra J Scott;
Andrey A Shabalin;
Reza Sodaei;
Matthew Stephens;
Barbara E Stranger;
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Martijn van de Bunt;
Gao Wang;
Xiaoquan Wen;
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...More
PUBLISHED:
2017
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SOURCE:
Genome Research,
VOLUME:
27,
ISSUE:
11
INDEXED IN:
Scopus
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TITLE:
Improving genetic diagnosis in Mendelian disease with transcriptome sequencing
AUTHORS:
Cummings, BB; Marshall, JL; Tukiainen, T; Lek, M; Donkervoort, S; Foley, AR; Bolduc, V; Waddell, LB; Sandaradura, SA; O'Grady, GL; Estrella, E; Reddy, HM; Zhao, F; Weisburd, B; Karczewski, KJ; O'Donnell Luria, AH; Birnbaum, D; Sarkozy, A; Hu, Y; Gonorazky, H;
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Ghaoui, R;
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Topf, A;
Kang, PB;
Beggs, AH;
North, KN;
Straub, V;
Dowling, JJ;
Muntoni, F;
Clarke, NF;
Cooper, ST;
Bönnemann, CG;
MacArthur, DG;
Ardlie, KG;
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Gelfand, ET;
Segrè, AV;
Aguet, F;
Sullivan, TJ;
Li, X;
Nedzel, JL;
Trowbridge, CA;
Hadley, K;
Huang, KH;
Noble, MS;
Nguyen, DT;
Nobel, AB;
Wright, FA;
Shabalin, AA;
Palowitch, JJ;
Zhou, YH;
Dermitzakis, ET;
McCarthy, MI;
Payne, AJ;
Lappalainen, T;
Castel, S;
Kim Hellmuth, S;
Mohammadi, P;
Battle, A;
Parsana, P;
Mostafavi, S;
Brown, A;
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Delaneau, O;
Panousis, N;
Howald, C;
Van De Bunt, M;
Guigo, R;
Monlong, J;
Reverter, F;
Garrido, D;
Munoz, M;
Bogu, G;
Sodaei, R;
Papasaikas, P;
Ndungu, AW;
Montgomery, SB;
Li, X;
Fresard, L;
Davis, JR;
Tsang, EK;
Zappala, Z;
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Liu, B;
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Saha, A;
Kim, Y;
Strober, BJ;
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Pritchard, JK;
Wen, X;
Urbut, S;
Cox, NJ;
Nicolae, DL;
Gamazon, ER;
Im, HK;
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Engelhardt, BE;
Park, Y;
Jo, B;
McDowell, IC;
Gewirtz, A;
Gliner, G;
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Hall, I;
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Scott, A;
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Eskin, E;
Peterson, C;
Hormozdiari, F;
Kang, EY;
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Han, B;
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Feinberg, AP;
Rizzardi, LF;
Hansen, KD;
Hickey, P;
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Li, JB;
Snyder, M;
Tang, H;
Jiang, L;
Lin, S;
Stranger, BE;
Fernando, M;
Oliva, M;
Stamatoyannopoulos, J;
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Halow, J;
Sandstrom, R;
Haugen, E;
Johnson, A;
Lee, K;
Bates, D;
Diegel, M;
Pierce, BL;
Chen, L;
Kibriya, MG;
Jasmine, F;
Doherty, J;
Demanelis, K;
Smith, KS;
Li, Q;
Zhang, R;
Nierras, CR;
Moore, HM;
Rao, A;
Guan, P;
Vaught, JB;
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McDonald, A;
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Shad, S;
Lonsdale, JT;
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Hasz, R;
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Johnson, M;
Washington, M;
Brigham, LE;
Johns, C;
Wheeler, J;
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Moser, MT;
Karasik, E;
Gillard, BM;
Kumar, R;
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Mash, DC;
Davis, DA;
Undale, AH;
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Robinson, KL;
Sobin, L;
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Hunter, S;
Hariharan, P;
Singh, S;
Um, KS;
Matose, T;
Tomadzewski, MM;
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Zerbino, DR;
Juettmann, T;
Taylor, K;
Ruffier, M;
Sheppard, D;
Trevanion, S;
Flicek, P;
Kent, WJ;
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Haeussler, M;
Lee, CM;
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Vivan, J;
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Goldman, M;
Craft, B;
Li, G;
Ferreira, PG
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Basha, O;
Xi, HS;
Quan, J;
Sammeth, M;
Zaugg, JB;
...More
PUBLISHED:
2017
,
SOURCE:
Science Translational Medicine,
VOLUME:
9,
ISSUE:
386
INDEXED IN:
Scopus
CrossRef
:
454
IN MY:
ORCID
30
TITLE:
Landscape of X chromosome inactivation across human tissues
Full Text
AUTHORS:
Taru Tukiainen; Alexandra-Chloé Villani; Angela Yen; Manuel A Rivas; Jamie L Marshall; Rahul Satija; Matt Aguirre; Laura Gauthier; Mark Fleharty; Andrew Kirby; Beryl B Cummings; Stephane E Castel; Konrad J Karczewski; François Aguet; Andrea Byrnes; François Aguet; Kristin G Ardlie; Beryl B Cummings; Ellen T Gelfand; Gad Getz;
Kane Hadley;
Robert E Handsaker;
Katherine H Huang;
Seva Kashin;
Konrad J Karczewski;
Monkol Lek;
Xiao Li;
Daniel G MacArthur;
Jared L Nedzel;
Duyen T Nguyen;
Michael S Noble;
Ayellet V Segrè;
Casandra A Trowbridge;
Taru Tukiainen;
Nathan S Abell;
Brunilda Balliu;
Ruth Barshir;
Omer Basha;
Alexis Battle;
Gireesh K Bogu;
Andrew Brown;
Christopher D Brown;
Stephane E Castel;
Lin S Chen;
Colby Chiang;
Donald F Conrad;
Nancy J Cox;
Farhan N Damani;
Joe R Davis;
Olivier Delaneau;
Emmanouil T Dermitzakis;
Barbara E Engelhardt;
Eleazar Eskin;
Pedro G Ferreira
;
Laure Frésard;
Eric R Gamazon;
Diego Garrido-Martín;
Ariel D H Gewirtz;
Genna Gliner;
Michael J Gloudemans;
Roderic Guigo;
Ira M Hall;
Buhm Han;
Yuan He;
Farhad Hormozdiari;
Cedric Howald;
Hae Kyung Im;
Brian Jo;
Eun Yong Kang;
Yungil Kim;
Sarah Kim-Hellmuth;
Tuuli Lappalainen;
Gen Li;
Xin Li;
Boxiang Liu;
Serghei Mangul;
Mark I McCarthy;
Ian C McDowell;
Pejman Mohammadi;
Jean Monlong;
Stephen B Montgomery;
Manuel Muñoz-Aguirre;
Anne W Ndungu;
Dan L Nicolae;
Andrew B Nobel;
Meritxell Oliva;
Halit Ongen;
John J Palowitch;
Nikolaos Panousis;
Panagiotis Papasaikas;
YoSon Park;
Princy Parsana;
Anthony J Payne;
Christine B Peterson;
Jie Quan;
Ferran Reverter;
Chiara Sabatti;
Ashis Saha;
Michael Sammeth;
Alexandra J Scott;
Andrey A Shabalin;
Reza Sodaei;
Matthew Stephens;
Barbara E Stranger;
Benjamin J Strober;
Jae Hoon Sul;
Emily K Tsang;
Sarah Urbut;
Martijn van de Bunt;
Gao Wang;
Xiaoquan Wen;
Fred A Wright;
Hualin S Xi;
Esti Yeger-Lotem;
Zachary Zappala;
Judith B Zaugg;
Yi-Hui Zhou;
Joshua M Akey;
Daniel Bates;
Joanne Chan;
Lin S Chen;
Melina Claussnitzer;
Kathryn Demanelis;
Morgan Diegel;
Jennifer A Doherty;
Andrew P Feinberg;
Marian S Fernando;
Jessica Halow;
Kasper D Hansen;
Eric Haugen;
Peter F Hickey;
Lei Hou;
Farzana Jasmine;
Ruiqi Jian;
Lihua Jiang;
Audra Johnson;
Rajinder Kaul;
Manolis Kellis;
Muhammad G Kibriya;
Kristen Lee;
Jin Billy Li;
Qin Li;
Xiao Li;
Jessica Lin;
Shin Lin;
Sandra Linder;
Caroline Linke;
Yaping Liu;
Matthew T Maurano;
Benoit Molinie;
Stephen B Montgomery;
Jemma Nelson;
Fidencio J Neri;
Meritxell Oliva;
Yongjin Park;
Brandon L Pierce;
Nicola J Rinaldi;
Lindsay F Rizzardi;
Richard Sandstrom;
Andrew Skol;
Kevin S Smith;
Michael P Snyder;
John Stamatoyannopoulos;
Barbara E Stranger;
Hua Tang;
Emily K Tsang;
Li Wang;
Meng Wang;
Nicholas Van Wittenberghe;
Fan Wu;
Rui Zhang;
Concepcion R Nierras;
Philip A Branton;
Latarsha J Carithers;
Ping Guan;
Helen M Moore;
Abhi Rao;
Jimmie B Vaught;
Sarah E Gould;
Nicole C Lockart;
Casey Martin;
Jeffery P Struewing;
Simona Volpi;
Anjene M Addington;
Susan E Koester;
Roger R Little;
Lori E Brigham;
Richard Hasz;
Marcus Hunter;
Christopher Johns;
Mark Johnson;
Gene Kopen;
William F Leinweber;
John T Lonsdale;
Alisa McDonald;
Bernadette Mestichelli;
Kevin Myer;
Brian Roe;
Michael Salvatore;
Saboor Shad;
Jeffrey A Thomas;
Gary Walters;
Michael Washington;
Joseph Wheeler;
Jason Bridge;
Barbara A Foster;
Bryan M Gillard;
Ellen Karasik;
Rachna Kumar;
Mark Miklos;
Michael T Moser;
Scott D Jewell;
Robert G Montroy;
Daniel C Rohrer;
Dana R Valley;
David A Davis;
Deborah C Mash;
Anita H Undale;
Anna M Smith;
David E Tabor;
Nancy V Roche;
Jeffrey A McLean;
Negin Vatanian;
Karna L Robinson;
Leslie Sobin;
Mary E Barcus;
Kimberly M Valentino;
Liqun Qi;
Steven Hunter;
Pushpa Hariharan;
Shilpi Singh;
Ki Sung Um;
Takunda Matose;
Maria M Tomaszewski;
Laura K Barker;
Maghboeba Mosavel;
Laura A Siminoff;
Heather M Traino;
Paul Flicek;
Thomas Juettemann;
Magali Ruffier;
Dan Sheppard;
Kieron Taylor;
Stephen J Trevanion;
Daniel R Zerbino;
Brian Craft;
Mary Goldman;
Maximilian Haeussler;
James J Kent;
Christopher M Lee;
Benedict Paten;
Kate R Rosenbloom;
John Vivian;
Jingchun Zhu;
Tuuli Lappalainen;
Aviv Regev;
Kristin G Ardlie;
Nir Hacohen;
Daniel G MacArthur;
...More
PUBLISHED:
2017
,
SOURCE:
Nature,
VOLUME:
550,
ISSUE:
7675
INDEXED IN:
Scopus
CrossRef
:
681
IN MY:
ORCID
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