Biomolecular Simulation (BioSIM)
Center for Health Technology and Services Research (CINTESIS) :: Clinical and Translational Research
AuthID: I-000-B6D
Publications Actions
Publications at Authenticus Institutional Profile
An Authenticus institution (group) is an organization which consists of a set of researchers (institutional/group team). The set of researchers depends on the organizational structure of the institution per year and can be set at the institution profile, under ‘Researchers’ interface. Based on the institutional team we produce listings of publications, statistics and institutional reports.
Publications displayed at an Authenticus institutional profile depend on two parameters:
- Researchers team associated with the institution per year.
- Publications source type.
We define 3 types of publication sources:
- Validated by team members - includes all publications validated by team members. Requires the definition of the institutional team.
- All published by team members - includes all publications validated by the institution team members plus all not-validated (only identified) publications. Requires the definition of the institutional team.
- Affiliation Based - includes publications that have the institution/group in the publication affiliation. Does not require institutional team, but at the same time does not guarantee that all publications will be listed.
External
Internal
No data about last update.
Rules:
This actions updates publications citations of every team member.
Only validated by team members publications are included.
Only the current year team is included in this action.>
The action is executed in the background, thus the results are NOT immediate.
This actions can be executed only once a month!
Only validated by team members publications are included.
Only the current year team is included in this action.>
The action is executed in the background, thus the results are NOT immediate.
This actions can be executed only once a month!
No data about last update.
Rules:
This actions updates all pre print publications of the group/institution.
Only validated by current year team members publications are included.
The action is executed in the background, thus the results are NOT immediate.
This actions can be executed only once a day!
Only validated by current year team members publications are included.
The action is executed in the background, thus the results are NOT immediate.
This actions can be executed only once a day!
Publications Count: 432
8 Team MembersFilters -> Year: 2026
301
TITLE: Crown-Ether Type Podands as Alkali Metal Cation Extractants: Influence of the Number of Oxygens in the Chain Full Text
AUTHORS: Mario Valente; Sérgio F. Sousa ; Alexandre Lopes Magalhaes ; cristina freire ;
PUBLISHED: 2010, SOURCE: JOURNAL OF SOLUTION CHEMISTRY, VOLUME: 39, ISSUE: 8, PAGES: 1230-1242
AUTHORS: Mario Valente; Sérgio F. Sousa ; Alexandre Lopes Magalhaes ; cristina freire ;
PUBLISHED: 2010, SOURCE: JOURNAL OF SOLUTION CHEMISTRY, VOLUME: 39, ISSUE: 8, PAGES: 1230-1242
302
TITLE: Economic analysis of rituximab: In combination with cyclophosphamide, vincristine and prednisolone in the treatment of patients with advanced follicular lymphoma in portugal [Análise económica de rituximab: Em associação com ciclofosfamida, vincristina e prednisolona no tratamento de doentes com linfoma folicular avançado em portugal]
AUTHORS: Braga, P; Carvalho, S; Gomes, M; Guerra, L; Paulo, L; Marques, H ; Negreiro, F; Pereira, C; Silva, C; Teixeira, A;
PUBLISHED: 2010, SOURCE: Acta Medica Portuguesa, VOLUME: 23, ISSUE: 6, PAGES: 1025-1034
AUTHORS: Braga, P; Carvalho, S; Gomes, M; Guerra, L; Paulo, L; Marques, H ; Negreiro, F; Pereira, C; Silva, C; Teixeira, A;
PUBLISHED: 2010, SOURCE: Acta Medica Portuguesa, VOLUME: 23, ISSUE: 6, PAGES: 1025-1034
INDEXED IN: 
Scopus
Scopus303
TITLE: Factors influencing the binding of a potassium cation to a polyethylene glycol type podand in liquid-liquid extraction-a molecular dynamics study Full Text
AUTHORS: Mario Valente; Sérgio F. Sousa ; Magalhaes, AL ; cristina freire ;
PUBLISHED: 2010, SOURCE: THEORETICAL CHEMISTRY ACCOUNTS, VOLUME: 127, ISSUE: 5-6, PAGES: 681-687
AUTHORS: Mario Valente; Sérgio F. Sousa ; Magalhaes, AL ; cristina freire ;
PUBLISHED: 2010, SOURCE: THEORETICAL CHEMISTRY ACCOUNTS, VOLUME: 127, ISSUE: 5-6, PAGES: 681-687
304
TITLE: Fine scale mapping of the breast cancer 16q12 locus
AUTHORS: Miriam S Udler; Shahana Ahmed; Catherine S Healey; Kerstin Meyer; Jeffrey Struewing; Melanie Maranian; Erika M Kwon; Jinghui Zhang; Jonathan Tyrer; Eric Karlins; Radka Platte; Bolot Kalmyrzaev; Ed Dicks; Helen Field; Ana Teresa Maia ; Radhika Prathalingam; Andrew Teschendorff; Stewart McArthur; David R Doody; Robert Luben; ...More
PUBLISHED: 2010, SOURCE: HUMAN MOLECULAR GENETICS, VOLUME: 19, ISSUE: 12, PAGES: 2507-2515
AUTHORS: Miriam S Udler; Shahana Ahmed; Catherine S Healey; Kerstin Meyer; Jeffrey Struewing; Melanie Maranian; Erika M Kwon; Jinghui Zhang; Jonathan Tyrer; Eric Karlins; Radka Platte; Bolot Kalmyrzaev; Ed Dicks; Helen Field; Ana Teresa Maia ; Radhika Prathalingam; Andrew Teschendorff; Stewart McArthur; David R Doody; Robert Luben; ...More
PUBLISHED: 2010, SOURCE: HUMAN MOLECULAR GENETICS, VOLUME: 19, ISSUE: 12, PAGES: 2507-2515
305
TITLE: Identification of a 0.4 Kb deletion region in 10q26 associated with endometrial carcinoma
AUTHORS: Alves, M; Carreira, I ; Liberato, P; Ramos, S; Mafra, M; Inverno, AS; Maia, AT ; Martins, AP; Brito, M; Monteiro, C;
PUBLISHED: 2010, SOURCE: ONCOLOGY REPORTS, VOLUME: 23, ISSUE: 2, PAGES: 519-522
AUTHORS: Alves, M; Carreira, I ; Liberato, P; Ramos, S; Mafra, M; Inverno, AS; Maia, AT ; Martins, AP; Brito, M; Monteiro, C;
PUBLISHED: 2010, SOURCE: ONCOLOGY REPORTS, VOLUME: 23, ISSUE: 2, PAGES: 519-522
306
TITLE: Indeterminate cell histiocytosis in association with acute myeloid leukemia Full Text
AUTHORS: Ventura, F; Pereira, T; Duarte, MDL; Marques, H ; Pardal, F; Brito, C;
PUBLISHED: 2010, SOURCE: Dermatology Research and Practice, VOLUME: 2010, ISSUE: 1, PAGES: 1-4
AUTHORS: Ventura, F; Pereira, T; Duarte, MDL; Marques, H ; Pardal, F; Brito, C;
PUBLISHED: 2010, SOURCE: Dermatology Research and Practice, VOLUME: 2010, ISSUE: 1, PAGES: 1-4
307
TITLE: Influence of socio-demographic and clinical factors in health related quality of Life of hemato-oncologic patients [Influência dos factores socio-demográficos e clínicos na qualidade de vida relacionada com a saúde dos doentes hemato-oncológicos]
AUTHORS: Queiroz, L; Sousa, F; Marques, H ;
PUBLISHED: 2010, SOURCE: Arquivos de Medicina, VOLUME: 24, ISSUE: 3, PAGES: 79-87
AUTHORS: Queiroz, L; Sousa, F; Marques, H ;
PUBLISHED: 2010, SOURCE: Arquivos de Medicina, VOLUME: 24, ISSUE: 3, PAGES: 79-87
INDEXED IN: Scopus
Scopus308
TITLE: METASTATIC CALCIFICATION DETECTED ON BONE SCINTIGRAPHY Full Text
AUTHORS: Helder Fernandes; Jose Pedro Patricio; Patricia Oliveira; Ana Oliveira; Teresa Faria; Jorge Pereira; Gerardo Oliveira ;
PUBLISHED: 2010, SOURCE: ACTA MEDICA PORTUGUESA, VOLUME: 23, ISSUE: 4, PAGES: 731-734
AUTHORS: Helder Fernandes; Jose Pedro Patricio; Patricia Oliveira; Ana Oliveira; Teresa Faria; Jorge Pereira; Gerardo Oliveira ;
PUBLISHED: 2010, SOURCE: ACTA MEDICA PORTUGUESA, VOLUME: 23, ISSUE: 4, PAGES: 731-734
INDEXED IN: Scopus 
WOS
Scopus WOS309
TITLE: Molecular Dynamics Simulations: Difficulties, Solutions and Strategies for Treating Metalloenzymes
AUTHORS: Sérgio F. Sousa ; Fernandes, PA ; Ramos, MJ ;
PUBLISHED: 2010, SOURCE: Challenges and Advances in Computational Chemistry and Physics, VOLUME: 12, PAGES: 299-330
AUTHORS: Sérgio F. Sousa ; Fernandes, PA ; Ramos, MJ ;
PUBLISHED: 2010, SOURCE: Challenges and Advances in Computational Chemistry and Physics, VOLUME: 12, PAGES: 299-330
310
TITLE: Relationship Between Everolimus Blood Concentration Assessed Using the Innofluor Certican Fluorescence Polarization Immunoassay and the Architect i System Sirolimus Chemiluminescent Microparticle Immunoassay Full Text
AUTHORS: Coentrao, L ; Carvalho, C; Sampaio, S ; Oliveira, JG ; Pestana, MI ;
PUBLISHED: 2010, SOURCE: TRANSPLANTATION PROCEEDINGS, VOLUME: 42, ISSUE: 5, PAGES: 1867-1869
AUTHORS: Coentrao, L ; Carvalho, C; Sampaio, S ; Oliveira, JG ; Pestana, MI ;
PUBLISHED: 2010, SOURCE: TRANSPLANTATION PROCEEDINGS, VOLUME: 42, ISSUE: 5, PAGES: 1867-1869
311
TITLE: Ribonucleotide Reductase: A Mechanistic Portrait of Substrate Analogues Inhibitors
AUTHORS: Perez, MAS; Cerqueira, NMFSA ; Fernandes, PA ; Ramos, MJ ;
PUBLISHED: 2010, SOURCE: CURRENT MEDICINAL CHEMISTRY, VOLUME: 17, ISSUE: 26, PAGES: 2854-2872
AUTHORS: Perez, MAS; Cerqueira, NMFSA ; Fernandes, PA ; Ramos, MJ ;
PUBLISHED: 2010, SOURCE: CURRENT MEDICINAL CHEMISTRY, VOLUME: 17, ISSUE: 26, PAGES: 2854-2872
312
TITLE: Thymoglobulin down-regulates pentraxin 3 synthesis that correlates with acute rejection on kidney transplant patients Full Text
AUTHORS: Gerardo Oliveira ; Paula Xavier; Susana N Sampaio; Helena Alves;
PUBLISHED: 2010, SOURCE: 24th European Immunogenetics and Histocompatibility Conference/17th Annual Meeting of the Italian-Society-for-Immunogenetics-and-Transplantation-Biology in TISSUE ANTIGENS, VOLUME: 75, ISSUE: 5, PAGES: 594-595
AUTHORS: Gerardo Oliveira ; Paula Xavier; Susana N Sampaio; Helena Alves;
PUBLISHED: 2010, SOURCE: 24th European Immunogenetics and Histocompatibility Conference/17th Annual Meeting of the Italian-Society-for-Immunogenetics-and-Transplantation-Biology in TISSUE ANTIGENS, VOLUME: 75, ISSUE: 5, PAGES: 594-595
INDEXED IN: WOS
WOS313
TITLE: Virtual Screening in Drug Design and Development
AUTHORS: Sérgio F. Sousa ; Nuno M F S A Cerqueira ; Pedro A Fernandes ; Maria Joao Ramos ;
PUBLISHED: 2010, SOURCE: COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, VOLUME: 13, ISSUE: 5, PAGES: 442-453
AUTHORS: Sérgio F. Sousa ; Nuno M F S A Cerqueira ; Pedro A Fernandes ; Maria Joao Ramos ;
PUBLISHED: 2010, SOURCE: COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING, VOLUME: 13, ISSUE: 5, PAGES: 442-453
314
TITLE: Association of ESR1 gene tagging SNPs with breast cancer risk
AUTHORS: Alison M Dunning; Catherine S Healey; Caroline Baynes; Ana Teresa Maia ; Serena Scollen; Ana Vega; Raquel Rodriguez; Nuno L Barbosa Morais; Bruce A J Ponder; Yen Ling Low; Sheila Bingham; Christopher A Haiman; Loic Le Marchand; Annegien Broeks; Marjanka K Schmidt; John Hopper; Melissa Southey; Matthias W Beckmann; Peter A Fasching; Julian Peto; ...More
PUBLISHED: 2009, SOURCE: HUMAN MOLECULAR GENETICS, VOLUME: 18, ISSUE: 6, PAGES: 1131-1139
AUTHORS: Alison M Dunning; Catherine S Healey; Caroline Baynes; Ana Teresa Maia ; Serena Scollen; Ana Vega; Raquel Rodriguez; Nuno L Barbosa Morais; Bruce A J Ponder; Yen Ling Low; Sheila Bingham; Christopher A Haiman; Loic Le Marchand; Annegien Broeks; Marjanka K Schmidt; John Hopper; Melissa Southey; Matthias W Beckmann; Peter A Fasching; Julian Peto; ...More
PUBLISHED: 2009, SOURCE: HUMAN MOLECULAR GENETICS, VOLUME: 18, ISSUE: 6, PAGES: 1131-1139
315
TITLE: Comparative Analysis of the Performance of Commonly Available Density Functionals in the Determination of Geometrical Parameters for Zinc Complexes Full Text
AUTHORS: Sérgio F. Sousa ; Emanuela S Carvalho; Diana M Ferreira; Isabel S Tavares; Pedro A Fernandes ; Maria Joao Ramos ; Jose A N F Gomes ;
PUBLISHED: 2009, SOURCE: JOURNAL OF COMPUTATIONAL CHEMISTRY, VOLUME: 30, ISSUE: 16, PAGES: 2752-2763
AUTHORS: Sérgio F. Sousa ; Emanuela S Carvalho; Diana M Ferreira; Isabel S Tavares; Pedro A Fernandes ; Maria Joao Ramos ; Jose A N F Gomes ;
PUBLISHED: 2009, SOURCE: JOURNAL OF COMPUTATIONAL CHEMISTRY, VOLUME: 30, ISSUE: 16, PAGES: 2752-2763
316
TITLE: Direct Covalent Modification as a Strategy to Inhibit Nuclear Factor-Kappa B
AUTHORS: Pande, V; Sérgio F. Sousa ; Ramos, MJ ;
PUBLISHED: 2009, SOURCE: CURRENT MEDICINAL CHEMISTRY, VOLUME: 16, ISSUE: 32, PAGES: 4261-4273
AUTHORS: Pande, V; Sérgio F. Sousa ; Ramos, MJ ;
PUBLISHED: 2009, SOURCE: CURRENT MEDICINAL CHEMISTRY, VOLUME: 16, ISSUE: 32, PAGES: 4261-4273
317
TITLE: Direct Downregulation of Toll-Like Receptors by Anti-IL-2 Alpha Chain-Receptor Antibody in Cadaver Kidney Transplant Recipients
AUTHORS: Paula D P Xavier; Helena Alves; Jose G G de Oliveira ; Carla A R Santos Araujo ; Roberto L F Roncon Albuquerque ; Adelino F Leite Moreira ; Andrea S L Ribeiro; Susana M M Sampaio Norton ;
PUBLISHED: 2009, SOURCE: TRANSPLANTATION, VOLUME: 88, ISSUE: 6, PAGES: 848-849
AUTHORS: Paula D P Xavier; Helena Alves; Jose G G de Oliveira ; Carla A R Santos Araujo ; Roberto L F Roncon Albuquerque ; Adelino F Leite Moreira ; Andrea S L Ribeiro; Susana M M Sampaio Norton ;
PUBLISHED: 2009, SOURCE: TRANSPLANTATION, VOLUME: 88, ISSUE: 6, PAGES: 848-849
318
TITLE: Extent of differential allelic expression of candidate breast cancer genes is similar in blood and breast
AUTHORS: Ana Teresa Maia ; Inmaculada Spiteri; Alvin J X Lee; Martin O'Reilly; Linda Jones; Carlos Caldas; Bruce A J Ponder;
PUBLISHED: 2009, SOURCE: BREAST CANCER RESEARCH, VOLUME: 11, ISSUE: 6
AUTHORS: Ana Teresa Maia ; Inmaculada Spiteri; Alvin J X Lee; Martin O'Reilly; Linda Jones; Carlos Caldas; Bruce A J Ponder;
PUBLISHED: 2009, SOURCE: BREAST CANCER RESEARCH, VOLUME: 11, ISSUE: 6
319
TITLE: Gas-Phase Geometry Optimization of Biological Molecules as a Reasonable Alternative to a Continuum Environment Description: Fact, Myth, or Fiction?
AUTHORS: Sérgio F. Sousa ; Pedro Alexandrino Fernandes ; Maria Joao Ramos ;
PUBLISHED: 2009, SOURCE: JOURNAL OF PHYSICAL CHEMISTRY A, VOLUME: 113, ISSUE: 52, PAGES: 14231-14236
AUTHORS: Sérgio F. Sousa ; Pedro Alexandrino Fernandes ; Maria Joao Ramos ;
PUBLISHED: 2009, SOURCE: JOURNAL OF PHYSICAL CHEMISTRY A, VOLUME: 113, ISSUE: 52, PAGES: 14231-14236
320
TITLE: MADAMM: A multistaged docking with an automated molecular modeling protocol Full Text
AUTHORS: Cerqueira, NMFSA ; Bras, NF ; Fernandes, PA ; Ramos, MJ ;
PUBLISHED: 2009, SOURCE: PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, VOLUME: 74, ISSUE: 1, PAGES: 192-206
AUTHORS: Cerqueira, NMFSA ; Bras, NF ; Fernandes, PA ; Ramos, MJ ;
PUBLISHED: 2009, SOURCE: PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, VOLUME: 74, ISSUE: 1, PAGES: 192-206
