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Mário Nuno Ramos de Almeida Ramirez
AuthID:
R-000-CYZ
Publications
Confirmed
To Validate
Document Source:
All
Document Type:
All Document Types
Article (122)
Review (3)
Letter (2)
Article in Press (2)
Editorial Material (1)
Proceedings Paper (1)
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Order:
Year Dsc
Year Asc
Cit. WOS Dsc
IF WOS Dsc
Cit. Scopus Dsc
IF Scopus Dsc
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Results:
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Confirmed Publications: 131
11
TITLE:
A primer on microbial bioinformatics for nonbioinformaticians
AUTHORS:
Carrico, JA; Rossi, M; Moran Gilad, J; Van Domselaar, G;
Ramirez, M
;
PUBLISHED:
2018
,
SOURCE:
CLINICAL MICROBIOLOGY AND INFECTION,
VOLUME:
24,
ISSUE:
4
INDEXED IN:
WOS
CrossRef
:
44
IN MY:
ORCID
|
CIÊNCIAVITAE
12
TITLE:
chewBBACA: A complete suite for gene-by-gene schema creation and strain identification
AUTHORS:
Silva, M; Machado, MP; Silva, DN; Rossi, M; Moran Gilad, J; Santos, S;
Ramirez, M
; Carrico, JA;
PUBLISHED:
2018
,
SOURCE:
MICROBIAL GENOMICS,
VOLUME:
4,
ISSUE:
3
INDEXED IN:
WOS
CrossRef
:
161
IN MY:
ORCID
|
CIÊNCIAVITAE
13
TITLE:
Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens
AUTHORS:
Couto, N; Schuele, L; Raangs, EC; Machado, MP; Mendes, CI; Jesus, TF; Chlebowicz, M; Rosema, S;
Ramirez, M
; Carrico, JA; Autenrieth, IB; Friedrich, AW; Peter, S; Rossen, JW;
PUBLISHED:
2018
,
SOURCE:
SCIENTIFIC REPORTS,
VOLUME:
8,
ISSUE:
1
INDEXED IN:
Scopus
WOS
CrossRef
:
48
IN MY:
ORCID
|
CIÊNCIAVITAE
14
TITLE:
Increasing macrolide resistance among <i>Streptococcus</i> <i>agalactiae</i> causing invasive disease in non-pregnant adults was driven by a single capsular-transformed lineage, Portugal, 2009 to 2015
AUTHORS:
Lopes, E; Fernandes, T; Machado, MP; Carriço, JA; Mello Cristino, J;
Ramirez, M
;
Martins, ER
;
PUBLISHED:
2018
,
SOURCE:
EUROSURVEILLANCE,
VOLUME:
23,
ISSUE:
21
INDEXED IN:
Scopus
WOS
CrossRef
:
37
IN MY:
ORCID
|
CIÊNCIAVITAE
15
TITLE:
Pediatric Complicated Pneumonia Caused by <i>Streptococcus pneumoniae</i> Serotype 3 in 13-Valent Pneumococcal Conjugate Vaccinees, Portugal, 2010-2015
AUTHORS:
Silva Costa, C; Brito, MJ; Pinho, MD; Friaes, A; Aguiar, SI;
Ramirez, M
;
Melo Cristino, J
;
PUBLISHED:
2018
,
SOURCE:
EMERGING INFECTIOUS DISEASES,
VOLUME:
24,
ISSUE:
7
INDEXED IN:
WOS
IN MY:
ORCID
|
CIÊNCIAVITAE
16
TITLE:
Streptococcus pyogenes Causing Skin and Soft Tissue Infections Are Enriched in the Recently Emerged emm89 Clade 3 and Are Not Associated With Abrogation of CovRS
AUTHORS:
Pato, C;
Melo Cristino, J
;
Ramirez, M
; Friaes, A;
PUBLISHED:
2018
,
SOURCE:
FRONTIERS IN MICROBIOLOGY,
VOLUME:
9,
ISSUE:
OCT
INDEXED IN:
Scopus
WOS
CrossRef
:
9
IN MY:
ORCID
|
CIÊNCIAVITAE
17
TITLE:
A widespread family of polymorphic toxins encoded by temperate phages
AUTHORS:
Jamet, A; Touchon, M; Ribeiro Goncalves, B; Carrico, JA; Charbit, A; Nassif, X;
Ramirez, M
; Rocha, EPC;
PUBLISHED:
2017
,
SOURCE:
BMC BIOLOGY,
VOLUME:
15,
ISSUE:
1
INDEXED IN:
Scopus
WOS
CrossRef
:
33
IN MY:
ORCID
|
CIÊNCIAVITAE
18
TITLE:
Clonal and serotype dynamics of serogroup 6 isolates causing invasive pneumococcal disease in Portugal: 1999-2012
AUTHORS:
Diamantino Miranda, J;
Aguiar, SI
; Carrico, JA;
Melo Cristino, J
;
Ramirez, M
;
PUBLISHED:
2017
,
SOURCE:
PLOS ONE,
VOLUME:
12,
ISSUE:
2
INDEXED IN:
Scopus
WOS
CrossRef
:
8
IN MY:
ORCID
|
CIÊNCIAVITAE
19
TITLE:
PHYLOViZ 2.0: providing scalable data integration and visualization for multiple phylogenetic inference methods
AUTHORS:
Nascimento, M; Sousa, A;
Ramirez, M
;
Francisco, AP
; Carriço, JA; Vaz, C;
PUBLISHED:
2017
,
SOURCE:
BIOINFORMATICS,
VOLUME:
33,
ISSUE:
1
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
268
IN MY:
ORCID
|
CIÊNCIAVITAE
20
TITLE:
Streptococcus agalactiae Causing Neonatal Infections in Portugal (2005-2015): Diversification and Emergence of a CC17/PI-2b Multidrug Resistant Sublineage
Full Text
AUTHORS:
Martins, ER
; Pedroso Roussado, C;
Melo Cristino, J
;
Ramirez, M
; Oliveira, H; Vaz, T; Gião, M; Ferreira, R; Silva, AC; Costa, H;
Silva, MF
; Afonso, MA; Domingos, A; Marrão, G; Grossinho, J; Lopes, P; Felício, L; Lameirão, A; Mota Vieira, AP; Tomaz, M;
Ramos, MH;
Castro, AP;
Canhoto, N;
Afonso, T;
Pinto, M;
Chantre, O;
Marques, J;
Peres, I;
Daniel, I;
Canas, E;
Ferreira, T;
Marcelo, C;
Monteiro, L;
Lito, LM;
Martins, F;
Pessanha, MA;
Gonçalves, E;
Morais, T;
Marques, T;
Toscano, C;
Ribeiro, G
;
Tomé, R;
Pontes, C;
Boaventura, L;
Chaves, C
;
Reis, T;
Fonseca, AB;
Ribeiro, M
;
Gonçalves, H;
Faustino, A;
Alves, A;
Iglesias, MC;
Cabral, L;
Neto, O;
Sancho, L;
Coutinho, A;
Diogo, J;
Rodrigues, A;
Nascimento, I;
Ramalheira, E
;
Bessa, F;
Diaz, R;
Read, MA;
Alves, V;
Monteiro, M;
Rodrigues, V;
Pereira, P;
Paixão, P;
...More
PUBLISHED:
2017
,
SOURCE:
FRONTIERS IN MICROBIOLOGY,
VOLUME:
8,
ISSUE:
MAR
INDEXED IN:
Scopus
WOS
IN MY:
ORCID
|
CIÊNCIAVITAE
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