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TITLE: Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment  Full Text
AUTHORS: Marcos Zambrano, LJ; Karaduzovic Hadziabdic, K; Turukalo, TL; Przymus, P; Trajkovik, V; Aasmets, O; Berland, M; Gruca, A; Hasic, J; Hron, K; Klammsteiner, T; Kolev, M; Lahti, L; Lopes, MB ; Moreno, V; Naskinova, I; Org, E; Paciencia, I; Papoutsoglou, G; Shigdel, R; Stres, B; Vilne, B; Yousef, M; Zdravevski, E; Tsamardinos, I; Pau, ECD; Claesson, MJ; Moreno Indias, I; Truu, J; ...More
PUBLISHED: 2021, SOURCE: FRONTIERS IN MICROBIOLOGY, VOLUME: 12
INDEXED IN: Scopus WOS CrossRef: 134
IN MY: ORCID
32
TITLE: Learning Biomedical Networks: Toward Data-Informed Clinical Decision and Therapy
AUTHORS: Marta B Lopes ; Susana Vinga ;
PUBLISHED: 2021, SOURCE: Computational Biology - Advances in Artificial Intelligence, Computation, and Data Science
INDEXED IN: CrossRef
IN MY: ORCID
33
TITLE: Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions  Full Text
AUTHORS: Moreno Indias, I; Lahti, L; Nedyalkova, M; Elbere, I; Roshchupkin, G; Adilovic, M; Aydemir, O; Bakir Gungor, B; Pau, ECD; D'Elia, D; Desai, MS; Falquet, L; Gundogdu, A; Hron, K; Klammsteiner, T; Lopes, MB ; Marcos Zambrano, LJ; Marques, C; Mason, M; May, P; Pasic, L; Pio, G; Pongor, S; Promponas, VJ; Przymus, P; Saez Rodriguez, J; Sampri, A; Shigdel, R; Stres, B; Suharoschi, R; Truu, J; Truica, CO; Vilne, B; Vlachakis, D; Yilmaz, E; Zeller, G; Zomer, AL; Gomez Cabrero, D; Claesson, MJ; ...More
PUBLISHED: 2021, SOURCE: FRONTIERS IN MICROBIOLOGY, VOLUME: 12
INDEXED IN: Scopus WOS CrossRef: 45
IN MY: ORCID
34
TITLE: The Role of Network Science in Glioblastoma  Full Text
AUTHORS: Lopes, MB ; Martins, EP; Vinga, S ; Costa, BM ;
PUBLISHED: 2021, SOURCE: CANCERS, VOLUME: 13, ISSUE: 5
INDEXED IN: Scopus WOS CrossRef: 6
IN MY: ORCID
35
TITLE: Identification of Common Gene Signatures in Microarray and RNA-Sequencing Data Using Network-Based Regularization
AUTHORS: Diegues, I; Vinga, S ; Lopes, MB ;
PUBLISHED: 2020, SOURCE: 8th International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2020 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 12108 LNBI
INDEXED IN: Scopus CrossRef
IN MY: ORCID
36
TITLE: Network-Based Variable Selection for Survival Outcomes in Oncological Data
AUTHORS: Carrasquinha, E; Veríssimo, A; Lopes, MB ; Vinga, S ;
PUBLISHED: 2020, SOURCE: 8th International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2020 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 12108 LNBI
INDEXED IN: Scopus CrossRef
IN MY: ORCID
37
TITLE: Random sample consensus for the robust identification of outliers in cancer data
AUTHORS: Veríssimo, A; Lopes, MB ; Carrasquinha, E; Vinga, S ;
PUBLISHED: 2020, SOURCE: 16th International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2019 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 12313 LNBI
INDEXED IN: Scopus CrossRef
IN MY: ORCID
38
TITLE: TCox: Correlation-Based Regularization Applied to Colorectal Cancer Survival Data
AUTHORS: Peixoto, C; Lopes, MB ; Martins, M; Costa, L; Vinga, S ;
PUBLISHED: 2020, SOURCE: BIOMEDICINES, VOLUME: 8, ISSUE: 11
INDEXED IN: Scopus WOS CrossRef: 4
IN MY: ORCID
39
TITLE: Tracking intratumoral heterogeneity in glioblastoma via regularized classification of single-cell RNA-Seq data  Full Text
AUTHORS: Lopes, MB ; Vinga, S ;
PUBLISHED: 2020, SOURCE: BMC BIOINFORMATICS, VOLUME: 21, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 14
IN MY: ORCID
40
TITLE: Unravelling Breast and Prostate Common Gene Signatures by Bayesian Network Learning
AUTHORS: Villa Brito, J; Lopes, MB ; Carvalho, AM ; Vinga, S ;
PUBLISHED: 2020, SOURCE: 15th International Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2018 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 11925 LNBI
INDEXED IN: Scopus CrossRef
IN MY: ORCID
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