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Sara Alexandra Cordeiro Madeira
AuthID:
R-000-GAG
Publications
Confirmed
To Validate
Document Source:
All
Document Type:
All Document Types
Article (55)
Proceedings Paper (32)
Article in Press (3)
Review (3)
Correction (2)
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Confirmed Publications: 95
71
TITLE:
Parallel <i>e</i>-CCC-Biclustering: Mining Approximate Temporal Patterns in Gene Expression Time Series Using Parallel Biclustering
AUTHORS:
Cristóvao, F;
Madeira, SC
;
PUBLISHED:
2012
,
SOURCE:
6th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB)
in
6TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS,
VOLUME:
154
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
1
IN MY:
ORCID
|
CIÊNCIAVITAE
72
TITLE:
Prognostic Prediction Using Clinical Expression Time Series: Towards a Supervised Learning Approach Based on Meta-biclusters
AUTHORS:
Carreiro, AV; Ferreira, AJ;
Figueiredo, MAT
;
Madeira, SC
;
PUBLISHED:
2012
,
SOURCE:
6th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB)
in
6TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS,
VOLUME:
154
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
1
IN MY:
ORCID
|
CIÊNCIAVITAE
73
TITLE:
Regulatory Snapshots: Integrative Mining of Regulatory Modules from Expression Time Series and Regulatory Networks
Full Text
AUTHORS:
Goncalves, JP
;
Aires, RS
;
Francisco, AP
;
Madeira, SC
;
PUBLISHED:
2012
,
SOURCE:
PLOS ONE,
VOLUME:
7,
ISSUE:
5
INDEXED IN:
Scopus
WOS
CrossRef
:
8
IN MY:
ORCID
|
CIÊNCIAVITAE
74
TITLE:
Towards a Classification Approach using Meta-Biclustering: Impact of Discretization in the Analysis of Expression Time Series
AUTHORS:
André Valério Carreiro; Artur J Ferreira;
Mário A T Figueiredo
;
Sara Cordeiro Madeira
;
PUBLISHED:
2012
,
SOURCE:
J. Integr. Bioinform.,
VOLUME:
9,
ISSUE:
3
INDEXED IN:
Scopus
DBLP
IN MY:
ORCID
|
CIÊNCIAVITAE
75
TITLE:
Baiacu: A Tool for the Visual Analysis of the Saccharomyces Cerevisiae Regulatory Network
AUTHORS:
Ricardo S Aires
;
Joao A Carrico
;
Alexandre P Francisco
;
Sara C Madeira
;
PUBLISHED:
2011
,
SOURCE:
5th International Conference on Practical Applications of Computational Biology and Bioinformatics
in
5TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS (PACBB 2011),
VOLUME:
93
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
IN MY:
ORCID
|
DBLP
|
CIÊNCIAVITAE
76
TITLE:
Biclustering-Based Classification of Clinical Expression Time Series: A Case Study in Patients with Multiple Sclerosis
AUTHORS:
Carreiro, AV; Anunciaçao, O;
Carriço, JA
;
Madeira, SC
;
PUBLISHED:
2011
,
SOURCE:
5th International Conference on Practical Applications of Computational Biology and Bioinformatics
in
5TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS (PACBB 2011),
VOLUME:
93
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
3
IN MY:
ORCID
|
CIÊNCIAVITAE
77
TITLE:
PINTA: a web server for network-based gene prioritization from expression data
Full Text
AUTHORS:
Nitsch, D; Tranchevent, LC; Gonçalves, JP; Vogt, JK;
Madeira, SC
; Moreau, Y;
PUBLISHED:
2011
,
SOURCE:
NUCLEIC ACIDS RESEARCH,
VOLUME:
39,
ISSUE:
Web-Server-Issue
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
59
IN MY:
ORCID
|
CIÊNCIAVITAE
78
TITLE:
Prognostic Prediction through Biclustering-Based Classification of Clinical Gene Expression Time Series
AUTHORS:
André Valério Carreiro; Orlando Anunciação; João André Carriço;
Sara Cordeiro Madeira
;
PUBLISHED:
2011
,
SOURCE:
J. Integr. Bioinform.,
VOLUME:
8,
ISSUE:
3
INDEXED IN:
Scopus
DBLP
IN MY:
ORCID
|
CIÊNCIAVITAE
79
TITLE:
TFRank: network-based prioritization of regulatory associations underlying transcriptional responses
Full Text
AUTHORS:
Gonçalves, JP;
Francisco, AP
;
Mira, NP
;
Teixeira, MC
;
Sá Correia, I
;
Oliveira, AL
;
Madeira, SC
;
PUBLISHED:
2011
,
SOURCE:
BIOINFORMATICS,
VOLUME:
27,
ISSUE:
22
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
17
IN MY:
ORCID
|
CIÊNCIAVITAE
80
TITLE:
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface
Full Text
AUTHORS:
Dario Abdulrehman
;
Pedro Tiago Monteiro
;
Miguel Cacho Teixeira
;
Nuno Pereira Mira
;
Artur Bastos Lourenco
;
Sandra Costa dos Santos
;
Tania Rodrigues Cabrito
;
Alexandre Paulo Francisco
;
Sara Cordeiro Madeira
;
Ricardo Santos Aires
;
Arlindo Limede Oliveira
;
Isabel Sa Correia
;
Ana Teresa Freitas
;
PUBLISHED:
2011
,
SOURCE:
NUCLEIC ACIDS RESEARCH,
VOLUME:
39,
ISSUE:
SUPPL. 1
INDEXED IN:
Scopus
WOS
DBLP
CrossRef
:
149
IN MY:
ORCID
|
DBLP
|
CIÊNCIAVITAE
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