Ana Sofia Fernandes de Oliveira
AuthID: R-000-1GG
21
TITLE: Heme binding to the SARS-CoV-2 spike glycoprotein
AUTHORS: Samuel L Freeman; Sofia S F Oliveira; Andrea E Gallio; Annachiara Rosa; Maria K Simitakou; Christopher J Arthur; Adrian J Mulholland; Peter Cherepanov; Emma L Raven;
PUBLISHED: 2023, SOURCE: Journal of Biological Chemistry, VOLUME: 299, ISSUE: 8
AUTHORS: Samuel L Freeman; Sofia S F Oliveira; Andrea E Gallio; Annachiara Rosa; Maria K Simitakou; Christopher J Arthur; Adrian J Mulholland; Peter Cherepanov; Emma L Raven;
PUBLISHED: 2023, SOURCE: Journal of Biological Chemistry, VOLUME: 299, ISSUE: 8
22
TITLE: An expandable, modular de novo protein platform for precision redox engineering
AUTHORS: George H Hutchins; Claire E M Noble; Adrian A Bunzel; Christopher Williams; Paulina Dubiel; Sathish K N Yadav; Paul M Molinaro; Rob Barringer; Hector Blackburn; Benjamin J Hardy; Alice E Parnell; Charles Landau; Paul R Race; Thomas A A Oliver; Ronald L Koder; Matthew P Crump; Christiane Schaffitzel; Sofia A F Oliveira; Adrian J Mulholland; Ross L R Anderson;
PUBLISHED: 2023, SOURCE: Proceedings of the National Academy of Sciences of the United States of America, VOLUME: 120, ISSUE: 31
AUTHORS: George H Hutchins; Claire E M Noble; Adrian A Bunzel; Christopher Williams; Paulina Dubiel; Sathish K N Yadav; Paul M Molinaro; Rob Barringer; Hector Blackburn; Benjamin J Hardy; Alice E Parnell; Charles Landau; Paul R Race; Thomas A A Oliver; Ronald L Koder; Matthew P Crump; Christiane Schaffitzel; Sofia A F Oliveira; Adrian J Mulholland; Ross L R Anderson;
PUBLISHED: 2023, SOURCE: Proceedings of the National Academy of Sciences of the United States of America, VOLUME: 120, ISSUE: 31
23
TITLE: Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease
AUTHORS: Henry T H Chan; Sofia S F Oliveira; Christopher J Schofield; Adrian J Mulholland; Fernanda Duarte;
PUBLISHED: 2023, SOURCE: JACS Au, VOLUME: 3, ISSUE: 6
AUTHORS: Henry T H Chan; Sofia S F Oliveira; Christopher J Schofield; Adrian J Mulholland; Fernanda Duarte;
PUBLISHED: 2023, SOURCE: JACS Au, VOLUME: 3, ISSUE: 6
24
TITLE: SARS-CoV-2 spike variants differ in their allosteric responses to linoleic acid
AUTHORS: Sofia S F Oliveira; Deborah K Shoemark; Andrew D Davidson; Imre Berger; Christiane Schaffitzel; Adrian J Mulholland;
PUBLISHED: 2023, SOURCE: Journal of Molecular Cell Biology, VOLUME: 15, ISSUE: 3
AUTHORS: Sofia S F Oliveira; Deborah K Shoemark; Andrew D Davidson; Imre Berger; Christiane Schaffitzel; Adrian J Mulholland;
PUBLISHED: 2023, SOURCE: Journal of Molecular Cell Biology, VOLUME: 15, ISSUE: 3
25
TITLE: #COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol
AUTHORS: Abigail Dommer; Lorenzo Casalino; Fiona Kearns; Mia Rosenfeld; Nicholas Wauer; Surl Hee Ahn; John Russo; Sofia Oliveira; Clare Morris; Anthony Bogetti; Anda Trifan; Alexander Brace; Terra Sztain; Austin Clyde; Heng Ma; Chakra Chennubhotla; Hyungro Lee; Matteo Turilli; Syma Khalid; Teresa Tamayo Mendoza; ...More
PUBLISHED: 2023, SOURCE: International Journal of High Performance Computing Applications, VOLUME: 37, ISSUE: 1
AUTHORS: Abigail Dommer; Lorenzo Casalino; Fiona Kearns; Mia Rosenfeld; Nicholas Wauer; Surl Hee Ahn; John Russo; Sofia Oliveira; Clare Morris; Anthony Bogetti; Anda Trifan; Alexander Brace; Terra Sztain; Austin Clyde; Heng Ma; Chakra Chennubhotla; Hyungro Lee; Matteo Turilli; Syma Khalid; Teresa Tamayo Mendoza; ...More
PUBLISHED: 2023, SOURCE: International Journal of High Performance Computing Applications, VOLUME: 37, ISSUE: 1
26
TITLE: Dynamical Nonequilibrium Molecular Dynamics Simulations Identify Allosteric Sites and Positions Associated with Drug Resistance in the SARS-CoV-2 Main Protease
AUTHORS: Henry T H Chan; Sofia S F Oliveira; Christopher J Schofield; Adrian J Mulholland; Fernanda Duarte;
PUBLISHED: 2023, SOURCE: JACS Au, VOLUME: 3, ISSUE: 6
AUTHORS: Henry T H Chan; Sofia S F Oliveira; Christopher J Schofield; Adrian J Mulholland; Fernanda Duarte;
PUBLISHED: 2023, SOURCE: JACS Au, VOLUME: 3, ISSUE: 6
27
TITLE: Decrypting the languages of allostery in membrane-bound K-Ras4B using four complementaryin silicoapproaches
AUTHORS: Matteo Castelli; Filippo Marchetti; Sílvia Osuna; Sofia S F. Oliveira; Adrian J Mulholland; Stefano A Serapian; Giorgio Colombo;
PUBLISHED: 2023
AUTHORS: Matteo Castelli; Filippo Marchetti; Sílvia Osuna; Sofia S F. Oliveira; Adrian J Mulholland; Stefano A Serapian; Giorgio Colombo;
PUBLISHED: 2023
28
TITLE: Publisher Correction: The chloroplast protein HCF164 is predicted to be associated with Coffea SH9 resistance factor against Hemileia vastatrix Full Text
AUTHORS: Leonor Guerra-Guimarães; Carla Pinheiro; Ana Sofia F Oliveira; Andrea Mira-Jover; Javier Valverde; Fernanda de d F Guedes; Herlander Azevedo ; Vitor Várzea; Antonio Jesús Muñoz Pajares;
PUBLISHED: 2023, SOURCE: Scientific Reports, VOLUME: 13, ISSUE: 1
AUTHORS: Leonor Guerra-Guimarães; Carla Pinheiro; Ana Sofia F Oliveira; Andrea Mira-Jover; Javier Valverde; Fernanda de d F Guedes; Herlander Azevedo ; Vitor Várzea; Antonio Jesús Muñoz Pajares;
PUBLISHED: 2023, SOURCE: Scientific Reports, VOLUME: 13, ISSUE: 1
29
TITLE: Allosteric modulation by the fatty acid site in the glycosylated SARS-CoV-2 spike
AUTHORS: Sofia S F Oliveira; Fiona L Kearns; Mia A Rosenfeld; Lorenzo Casalino; Imre Berger; Christiane Schaffitzel; Andrew D Davidson; Rommie E Amaro; Adrian J Mulholland;
PUBLISHED: 2023
AUTHORS: Sofia S F Oliveira; Fiona L Kearns; Mia A Rosenfeld; Lorenzo Casalino; Imre Berger; Christiane Schaffitzel; Andrew D Davidson; Rommie E Amaro; Adrian J Mulholland;
PUBLISHED: 2023
30
TITLE: Substrate recognition and selectivity in SARS-CoV-2 main protease: Unveiling the role of subsite interactions through dynamical nonequilibrium molecular dynamics simulations
AUTHORS: Henry T H Chan; Sofia S F Oliveira; Adrian J Mulholland; Christopher J Schofield; Fernanda Duarte;
PUBLISHED: 2023
AUTHORS: Henry T H Chan; Sofia S F Oliveira; Adrian J Mulholland; Christopher J Schofield; Fernanda Duarte;
PUBLISHED: 2023
