51
TITLE: Towards a Phylogenetic Measure to Quantify HIV Incidence
AUTHORS: Libin, P; Versbraegen, N; Abecasis, AB; Gomes, P; Lenaerts, T; Nowé, A;
PUBLISHED: 2020, SOURCE: 31st Benelux Conference on Artificial Intelligence, BNAIC 2019 and 28th Belgian Dutch Machine Learning Conference, BENELEARN 2019 in Communications in Computer and Information Science, VOLUME: 1196
INDEXED IN: Scopus CrossRef
IN MY: ORCID
52
TITLE: Increasing prevalence of HIV-1 Transmitted Drug Resistance in Portugal: implications for first line treatment recommendations
AUTHORS: Marta Pingarilho; Victor Pimentel; Isabel Diogo; Sandra Fernandes; Mafalda Miranda; Andrea Pineda-Pena; Pieter Libin; Kristof Theys; Rosário R O Martins; Anne-Mieke Vandamme; Ricardo Camacho; Perpétua Gomes; Ana Abecasis;
PUBLISHED: 2020
INDEXED IN: CrossRef: 6
IN MY: ORCID
53
TITLE: Determinants of HIV-1 late presentation in a cohort of Portuguese HIV-1 patients
AUTHORS: Ana Cláudia Miranda; Mafalda Miranda; Marta Pingarilho; Victor Pimentel; João Torres; Susana Peres; Teresa Baptista Alberto; Perpetua Gomes; Ana Abecasis; Kamal Mansinho;
PUBLISHED: 2020
INDEXED IN: CrossRef
IN MY: ORCID
54
TITLE: Tuberculosis care for migrant patients in Portugal: a mixed methods study with primary healthcare providers  Full Text
AUTHORS: Tavares, AM; Garcia, AC; Gama, A; Abecasis, AB; Miguel Viveiros ; Dias, S ;
PUBLISHED: 2019, SOURCE: BMC HEALTH SERVICES RESEARCH, VOLUME: 19, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 9 Handle
IN MY: ORCID
55
TITLE: Geographic dispersal and genetic diversity of tick-borne phleboviruses (Phenuiviridae, Phlebovirus) as revealed by the analysis of L segment sequences  Full Text
AUTHORS: Pimentel, V; Afonso, R; Nunes, M; Vieira, ML; Bravo Barriga, D; Frontera, E; Martinez, M; Pereira, A; Maia, C; Paiva Cardoso, MD; Freitas, FB; Abecasis, AB; Parreira, R;
PUBLISHED: 2019, SOURCE: TICKS AND TICK-BORNE DISEASES, VOLUME: 10, ISSUE: 4
INDEXED IN: Scopus WOS CrossRef: 11
IN MY: ORCID
56
TITLE: Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
AUTHORS: Araujo, PMM; Carvalho, A; Pingarilho, M; Abecasis, AB; Osorio, NS; Faria, D; Pinho, R; Ferreira, J; Proencc, P; Nunes, S; Mouro, M; Teofilo, E; Pinheiro, S; Maltez, F; Manata, MJ; Germano, I; Simoes, J; Costa, O; Corte Real, R; Diniz, A; Serrado, M; Caldeira, L; Janeiro, N; Gaiao, G; Cristino, JM ; Mansinho, K; Baptista, T; Gomes, P; Diogo, I; Serrao, R; Pinheiro, C; Koch, C; Monteiro, F; Goncalves, MJ; Castro, RSE; Ramos, H; Oliveira, J; da Cunha, JS; Mota, V; Rodrigues, F; Tavares, R; Silva, AR; Roxo, F; Ivo, MS; Pocas, J; Ascencao, B; Pacheco, P; Caixeiro, M; Marques, N; Aleixo, MJ; Faria, T; da Silva, EG; de Abreu, RC; Neves, I; ...More
PUBLISHED: 2019, SOURCE: SCIENTIFIC REPORTS, VOLUME: 9
INDEXED IN: WOS Handle
57
TITLE: Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries
AUTHORS: Araújo, PMM; Carvalho, A; Pingarilho, M; Faria, D; Pinho, R; Ferreira, J; Proença, P; Nunes, S; Mouro, M; Teófilo, E; Pinheiro, S; Maltez, F; Manata, MJ; Germano, I; Simões, J; Costa, O; Corte Real, R; Diniz, A; Serrado, M; Caldeira, L; Janeiro, N; Gaião, G; Cristino, JM; Mansinho, K; Baptista, T; Gomes, P ; Diogo, I; Serrão, R; Pinheiro, C; Koch, C; Monteiro, F; Gonçalves, MJ; Castro, RS; Ramos, H; Oliveira, J; da Cunha, JS; Mota, V; Rodrigues, F; Tavares, R; Silva, AR; Roxo, F; Ivo, MS; Poças, J; Ascenção, B; Pacheco, P; Caixeiro, M; Marques, N; Aleixo, MJ; Faria, T; da Silva, EG; de Abreu, RC; Neves, I; Abecasis, AB; Osório, NS ; ...More
PUBLISHED: 2019, SOURCE: Scientific Reports, VOLUME: 9, ISSUE: 1
INDEXED IN: Scopus CrossRef: 12 Handle
IN MY: ORCID
58
TITLE: VIRULIGN: fast codon-correct alignment and annotation of viral genomes
AUTHORS: Libin, PJK; Deforche, K; Abecasis, AB; Theys, K;
PUBLISHED: 2019, SOURCE: BIOINFORMATICS, VOLUME: 35, ISSUE: 10
INDEXED IN: Scopus WOS CrossRef: 50
IN MY: ORCID
59
TITLE: A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes
AUTHORS: Fonseca, V; Libin, PJK; Theys, K; Faria, NR; Nunes, MRT; Restovic, MI; Freire, M; Giovanetti, M; Cuypers, L; Nowe, A; Abecasis, A; Deforche, K; Santiago, GA; de Siqueira, IC; San, EJ; Machado, KCB; Azevedo, V; Bispo de Filippis, AM; da Cunha, RV; Pybus, OG; Vandamme, AM; Alcantara, LCJ; de Oliveira, T; ...More
PUBLISHED: 2019, SOURCE: PLOS NEGLECTED TROPICAL DISEASES, VOLUME: 13, ISSUE: 5
INDEXED IN: Scopus WOS CrossRef: 53
IN MY: ORCID
60
TITLE: Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology
AUTHORS: Vasylyeva, TI; du Plessis, L; Pineda Pena, AC; Kuhnert, D; Lemey, P; Vandamme, AM; Gomes, P ; Camacho, RJ; Pybus, OG; Abecasis, AB; Faria, NR;
PUBLISHED: 2019, SOURCE: JOURNAL OF INFECTIOUS DISEASES, VOLUME: 220, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 21
IN MY: ORCID
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