Diogo Rodrigo Marques Pratas
AuthID: R-000-XY3
11
TITLE: Intra-host genomic diversity and integration landscape of human tissue-resident DNA virome Full Text
AUTHORS: Pyoria, Lari; Pratas, Diogo; Toppinen, Mari; Simmonds, Peter; Hedman, Klaus; Sajantila, Antti; Perdomo, Maria F.;
PUBLISHED: 2024, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 52, ISSUE: 21
AUTHORS: Pyoria, Lari; Pratas, Diogo; Toppinen, Mari; Simmonds, Peter; Hedman, Klaus; Sajantila, Antti; Perdomo, Maria F.;
PUBLISHED: 2024, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 52, ISSUE: 21
12
TITLE: Machine Learning-Driven Discovery and Database of Cyanobacteria Bioactive Compounds: A Resource for Therapeutics and Bioremediation Full Text
AUTHORS: Soares, Renato; Azevedo, Luisa ; Vasconcelos, Vitor; Pratas, Diogo; Sérgio F. Sousa; Carneiro, Joao ;
PUBLISHED: 2024, SOURCE: JOURNAL OF CHEMICAL INFORMATION AND MODELING, VOLUME: 64, ISSUE: 24
AUTHORS: Soares, Renato; Azevedo, Luisa ; Vasconcelos, Vitor; Pratas, Diogo; Sérgio F. Sousa; Carneiro, Joao ;
PUBLISHED: 2024, SOURCE: JOURNAL OF CHEMICAL INFORMATION AND MODELING, VOLUME: 64, ISSUE: 24
13
TITLE: AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data Full Text
AUTHORS: Silva, Jorge M.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: GIGASCIENCE, VOLUME: 13
AUTHORS: Silva, Jorge M.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: GIGASCIENCE, VOLUME: 13
14
TITLE: JARVIS3: an efficient encoder for genomic data
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: BIOINFORMATICS, VOLUME: 40, ISSUE: 12
AUTHORS: Sousa, Maria J. P.; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2024, SOURCE: BIOINFORMATICS, VOLUME: 40, ISSUE: 12
15
TITLE: Herpesviruses, polyomaviruses, parvoviruses, papillomaviruses, and anelloviruses in vestibular schwannoma
AUTHORS: Jauhiainen, Maria K.; Mohanraj, Ushanandini; Lehecka, Martin; Niemela, Mika; Hirvonen, Timo P.; Pratas, Diogo; Perdomo, Maria F.; Soderlund Venermo, Maria; Makitie, Antti A.; Sinkkonen, Saku T.;
PUBLISHED: 2023, SOURCE: JOURNAL OF NEUROVIROLOGY, VOLUME: 29, ISSUE: 2
AUTHORS: Jauhiainen, Maria K.; Mohanraj, Ushanandini; Lehecka, Martin; Niemela, Mika; Hirvonen, Timo P.; Pratas, Diogo; Perdomo, Maria F.; Soderlund Venermo, Maria; Makitie, Antti A.; Sinkkonen, Saku T.;
PUBLISHED: 2023, SOURCE: JOURNAL OF NEUROVIROLOGY, VOLUME: 29, ISSUE: 2
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TITLE: TargIDe: a machine -learning workflow for target identification of molecules with antibiofilm activity against<i> Pseudomonas</i> aeruginosa Full Text
AUTHORS: Carneiro, Joao ; Magalhaes, Rita P.; Roque, Victor de la Oliva M.; Simoes, Manuel ; Pratas, Diogo; Sérgio F. Sousa ;
PUBLISHED: 2023, SOURCE: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, VOLUME: 37, ISSUE: 5-6
AUTHORS: Carneiro, Joao ; Magalhaes, Rita P.; Roque, Victor de la Oliva M.; Simoes, Manuel ; Pratas, Diogo; Sérgio F. Sousa ;
PUBLISHED: 2023, SOURCE: JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN, VOLUME: 37, ISSUE: 5-6
17
TITLE: Mapping human pathogens in wastewater using a metatranscriptomic approach Full Text
AUTHORS: Carneiro, Joao ; Pascoal, Francisco; Semedo, Miguel; Pratas, Diogo; Tomasino, Maria Paola; Rego, Adriana; Carvalho, Maria de Fatima ; Mucha, Ana Paula ; Magalhaes, Catarina ;
PUBLISHED: 2023, SOURCE: ENVIRONMENTAL RESEARCH, VOLUME: 231
AUTHORS: Carneiro, Joao ; Pascoal, Francisco; Semedo, Miguel; Pratas, Diogo; Tomasino, Maria Paola; Rego, Adriana; Carvalho, Maria de Fatima ; Mucha, Ana Paula ; Magalhaes, Catarina ;
PUBLISHED: 2023, SOURCE: ENVIRONMENTAL RESEARCH, VOLUME: 231
18
TITLE: JARVIS2: a data compressor for large genome sequences
AUTHORS: Pratas, Diogo; Pinho, Armando J. ;
PUBLISHED: 2023, SOURCE: Data Compression Conference (DCC) in 2023 DATA COMPRESSION CONFERENCE, DCC
AUTHORS: Pratas, Diogo; Pinho, Armando J. ;
PUBLISHED: 2023, SOURCE: Data Compression Conference (DCC) in 2023 DATA COMPRESSION CONFERENCE, DCC
19
TITLE: JARVIS2: A data compressor for large genome sequences
AUTHORS: Diogo Pratas; Armando Pinho;
PUBLISHED: 2023, SOURCE: 2023 Data Compression Conference, DCC 2023 in Data Compression Conference Proceedings, VOLUME: 2023-March
AUTHORS: Diogo Pratas; Armando Pinho;
PUBLISHED: 2023, SOURCE: 2023 Data Compression Conference, DCC 2023 in Data Compression Conference Proceedings, VOLUME: 2023-March
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TITLE: AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data Full Text
AUTHORS: Silva, Jorge M.; Qi, Weihong; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2023, SOURCE: GIGASCIENCE, VOLUME: 12
AUTHORS: Silva, Jorge M.; Qi, Weihong; Pinho, Armando J.; Pratas, Diogo;
PUBLISHED: 2023, SOURCE: GIGASCIENCE, VOLUME: 12
