Department of Computer Science (DCC)
Departamento de Ciências dos Computadores

University of Porto (UP) :: Faculty of Sciences (FCUP)

AuthID: I-000-0JZ
Publications Actions
Publications at Authenticus Institutional Profile

An Authenticus institution (group) is an organization which consists of a set of researchers (institutional/group team). The set of researchers depends on the organizational structure of the institution per year and can be set at the institution profile, under ‘Researchers’ interface. Based on the institutional team we produce listings of publications, statistics and institutional reports. 

Publications displayed at an Authenticus institutional profile depend on two parameters:

  • Researchers team associated with the institution per year. 
  • Publications source type. 

We define 3 types of publication sources:

  • Validated by team members - includes all publications validated by team members. Requires the definition of the institutional team. 
  • All published by team members - includes all publications validated by the institution team members plus all not-validated (only identified) publications. Requires the definition of the institutional team. 
  • Affiliation Based - includes publications that have the institution/group in the publication affiliation. Does not require institutional team, but at the same time does not guarantee that all publications will be listed. 
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Update PrePrints

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 This actions updates all pre print publications of the group/institution.
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Publications Count: 2727

43 Team Members
Filters -> Year: 2025
1121
TITLE: Identifying cis-mediators for trans-eQTLs across many human tissues using genomic mediation analysis
AUTHORS: Fan Yang; Jiebiao Wang; Brandon L Pierce; Lin S Chen; François Aguet; Kristin G Ardlie; Beryl B Cummings; Ellen T Gelfand; Gad Getz; Kane Hadley; Robert E Handsaker; Katherine H Huang; Seva Kashin; Konrad J Karczewski; Monkol Lek; Xiao Li; Daniel G MacArthur; Jared L Nedzel; Duyen T Nguyen; Michael S Noble; Ayellet V Segrè; Casandra A Trowbridge; Taru Tukiainen; Nathan S Abell; Brunilda Balliu; Ruth Barshir; Omer Basha; Alexis Battle; Gireesh K Bogu; Andrew Brown; Christopher D Brown; Stephane E Castel; Colby Chiang; Donald F Conrad; Nancy J Cox; Farhan N Damani; Joe R Davis; Olivier Delaneau; Emmanouil T Dermitzakis; Barbara E Engelhardt; Eleazar Eskin; Pedro G Ferreira ; Laure Frésard; Eric R Gamazon; Diego Garrido Martín; Ariel D H Gewirtz; Genna Gliner; Michael J Gloudemans; Roderic Guigo; Ira M Hall; Buhm Han; Yuan He; Farhad Hormozdiari; Cedric Howald; Hae Kyung Im; Brian Jo; Eun Yong Kang; Yungil Kim; Sarah Kim Hellmuth; Tuuli Lappalainen; Gen Li; Xin Li; Boxiang Liu; Serghei Mangul; Mark I McCarthy; Ian C McDowell; Pejman Mohammadi; Jean Monlong; Stephen B Montgomery; Manuel Muñoz Aguirre; Anne W Ndungu; Dan L Nicolae; Andrew B Nobel; Meritxell Oliva; Halit Ongen; John J Palowitch; Nikolaos Panousis; Panagiotis Papasaikas; Yo Son Park; Princy Parsana; Anthony J Payne; Christine B Peterson; Jie Quan; Ferran Reverter; Chiara Sabatti; Ashis Saha; Michael Sammeth; Alexandra J Scott; Andrey A Shabalin; Reza Sodaei; Matthew Stephens; Barbara E Stranger; Benjamin J Strober; Jae Hoon Sul; Emily K Tsang; Sarah Urbut; Martijn van de Bunt; Gao Wang; Xiaoquan Wen; Fred A Wright; ...More
PUBLISHED: 2017, SOURCE: Genome Research, VOLUME: 27, ISSUE: 11, PAGES: 1859-1871
INDEXED IN: Scopus
1122
TITLE: Identifying top relevant dates for implicit time sensitive queries  Full Text
AUTHORS: Ricardo Campos ; Gael Dias; Alipio Mario Jorge ; Celia Nunes ;
PUBLISHED: 2017, SOURCE: INFORMATION RETRIEVAL JOURNAL, VOLUME: 20, ISSUE: 4, PAGES: 363-398
INDEXED IN: Scopus WOS DBLP CrossRef: 15
1123
TITLE: Improving Diagram Assessment in Mooshak
AUTHORS: Helder Correia; José Paulo Leal ; José Carlos Paiva ;
PUBLISHED: 2017, SOURCE: 20th International Conference on Technology Enhanced Assessment, TEA 2017 in Technology Enhanced Assessment, 20th International Conference, TEA 2017, Barcelona, Spain, October 5-6, 2017, Revised Selected Papers., VOLUME: 829, PAGES: 69-82
INDEXED IN: Scopus DBLP CrossRef
1124
TITLE: Improving genetic diagnosis in Mendelian disease with transcriptome sequencing
AUTHORS: Cummings, BB; Marshall, JL; Tukiainen, T; Lek, M; Donkervoort, S; Foley, AR; Bolduc, V; Waddell, LB; Sandaradura, SA; O'Grady, GL; Estrella, E; Reddy, HM; Zhao, F; Weisburd, B; Karczewski, KJ; O'Donnell Luria, AH; Birnbaum, D; Sarkozy, A; Hu, Y; Gonorazky, H; Claeys, K; Joshi, H; Bournazos, A; Oates, EC; Ghaoui, R; Davis, MR; Laing, NG; Topf, A; Kang, PB; Beggs, AH; North, KN; Straub, V; Dowling, JJ; Muntoni, F; Clarke, NF; Cooper, ST; Bönnemann, CG; MacArthur, DG; Ardlie, KG; Getz, G; Gelfand, ET; Segrè, AV; Aguet, F; Sullivan, TJ; Li, X; Nedzel, JL; Trowbridge, CA; Hadley, K; Huang, KH; Noble, MS; Nguyen, DT; Nobel, AB; Wright, FA; Shabalin, AA; Palowitch, JJ; Zhou, YH; Dermitzakis, ET; McCarthy, MI; Payne, AJ; Lappalainen, T; Castel, S; Kim Hellmuth, S; Mohammadi, P; Battle, A; Parsana, P; Mostafavi, S; Brown, A; Ongen, H; Delaneau, O; Panousis, N; Howald, C; Van De Bunt, M; Guigo, R; Monlong, J; Reverter, F; Garrido, D; Munoz, M; Bogu, G; Sodaei, R; Papasaikas, P; Ndungu, AW; Montgomery, SB; Li, X; Fresard, L; Davis, JR; Tsang, EK; Zappala, Z; Abell, NS; Gloudemans, MJ; Liu, B; Damani, FN; Saha, A; Kim, Y; Strober, BJ; He, Y; Stephens, M; Pritchard, JK; Wen, X; Urbut, S; Cox, NJ; Nicolae, DL; Gamazon, ER; Im, HK; Brown, CD; Engelhardt, BE; Park, Y; Jo, B; McDowell, IC; Gewirtz, A; Gliner, G; Conrad, D; Hall, I; Chiang, C; Scott, A; Sabatti, C; Eskin, E; Peterson, C; Hormozdiari, F; Kang, EY; Mangul, S; Han, B; Sul, JH; Feinberg, AP; Rizzardi, LF; Hansen, KD; Hickey, P; Akey, J; Kellis, M; Li, JB; Snyder, M; Tang, H; Jiang, L; Lin, S; Stranger, BE; Fernando, M; Oliva, M; Stamatoyannopoulos, J; Kaul, R; Halow, J; Sandstrom, R; Haugen, E; Johnson, A; Lee, K; Bates, D; Diegel, M; Pierce, BL; Chen, L; Kibriya, MG; Jasmine, F; Doherty, J; Demanelis, K; Smith, KS; Li, Q; Zhang, R; Nierras, CR; Moore, HM; Rao, A; Guan, P; Vaught, JB; Branton, PA; Carithers, LJ; Volpi, S; Struewing, JP; Martin, CG; Nicole, LC; Koester, SE; Addington, AM; Little, AR; Leinweber, WF; Thomas, JA; Kopen, G; McDonald, A; Mestichelli, B; Shad, S; Lonsdale, JT; Salvatore, M; Hasz, R; Walters, G; Johnson, M; Washington, M; Brigham, LE; Johns, C; Wheeler, J; Roe, B; Hunter, M; Myer, K; Foster, BA; Moser, MT; Karasik, E; Gillard, BM; Kumar, R; Bridge, J; Miklos, M; Jewell, SD; Rohrer, DC; Valley, D; Montroy, RG; Mash, DC; Davis, DA; Undale, AH; Smith, AM; Tabor, DE; Roche, NV; McLean, JA; Vatanian, N; Robinson, KL; Sobin, L; Barcus, ME; Valentino, KM; Qi, L; Hunter, S; Hariharan, P; Singh, S; Um, KS; Matose, T; Tomadzewski, MM; Siminoff, LA; Traino, HM; Mosavel, M; Barker, LK; Zerbino, DR; Juettmann, T; Taylor, K; Ruffier, M; Sheppard, D; Trevanion, S; Flicek, P; Kent, WJ; Rosenbloom, KR; Haeussler, M; Lee, CM; Paten, B; Vivan, J; Zhu, J; Goldman, M; Craft, B; Li, G; Ferreira, PG ; Yeger Lotem, E; Maurano, MT; Barshir, R; Basha, O; Xi, HS; Quan, J; Sammeth, M; Zaugg, JB; ...More
PUBLISHED: 2017, SOURCE: Science Translational Medicine, VOLUME: 9, ISSUE: 386
INDEXED IN: Scopus CrossRef: 569
1125
TITLE: Improving Incremental Recommenders with Online Bagging
AUTHORS: Joao Vinagre ; Alipio Mario Jorge ; Joao Gama ;
PUBLISHED: 2017, SOURCE: 18th EPIA Conference on Artificial Intelligence (EPIA) in PROGRESS IN ARTIFICIAL INTELLIGENCE (EPIA 2017), VOLUME: 10423, PAGES: 597-607
INDEXED IN: Scopus WOS DBLP CrossRef
1126
TITLE: Improving the benchmarking of social media content strategies using clustering and KPI
AUTHORS: Luciana Oliveira ; Alvaro Figueira ;
PUBLISHED: 2017, SOURCE: International Conference on ENTERprise Information Systems (CENTERIS) / International Conference on Project MANagement (ProjMAN) / International Conference on Health and Social Care Information Systems and Technologies (HCist) in CENTERIS 2017 - INTERNATIONAL CONFERENCE ON ENTERPRISE INFORMATION SYSTEMS / PROJMAN 2017 - INTERNATIONAL CONFERENCE ON PROJECT MANAGEMENT / HCIST 2017 - INTERNATIONAL CONFERENCE ON HEALTH AND SOCIAL CARE INFORMATION SYSTEMS AND TECHNOLOGIES, CENTERI, VOLUME: 121, PAGES: 826-834
INDEXED IN: Scopus WOS CrossRef: 5
1127
TITLE: Inhabitation machines: determinism and principality
AUTHORS: Sandra Alves ; Sabine Broda ;
PUBLISHED: 2017, SOURCE: Ninth Workshop on Non-Classical Models of Automata and Applications, NCMA 2017, Prague, Czech Republic, August 17-18, 2017., PAGES: 57-70
INDEXED IN: DBLP
1128
TITLE: Introduction to the 33rd international conference on logic programming special issue
AUTHORS: Ricardo Rocha ; Tran Cao Son;
PUBLISHED: 2017, SOURCE: THEORY AND PRACTICE OF LOGIC PROGRAMMING, VOLUME: 17, ISSUE: 5-6, PAGES: 684-688
INDEXED IN: Scopus WOS DBLP CrossRef
1129
TITLE: Jasmin: High-Assurance and High-Speed Cryptography. High-Assurance and High-Speed Cryptography  Full Text
AUTHORS: José Bacelar Almeida ; Manuel Barbosa ; Gilles Barthe ; Arthur Blot; Benjamin Grégoire; Vincent Laporte; Tiago Oliveira ; Hugo Pacheco ; Benedikt Schmidt; Pierre Yves Strub;
PUBLISHED: 2017, SOURCE: 24th ACM-SIGSAC Conference on Computer and Communications Security (ACM CCS) in CCS'17: PROCEEDINGS OF THE 2017 ACM SIGSAC CONFERENCE ON COMPUTER AND COMMUNICATIONS SECURITY, VOLUME: Part F131467, PAGES: 1807-1823
INDEXED IN: Scopus WOS DBLP CrossRef: 72
1130
TITLE: Joint Design of Massive MIMO Precoder and Security Scheme for Multiuser Scenarios under Reciprocal Channel Conditions  Full Text
AUTHORS: Gustavo Anjos; Daniel Castanheira ; Adao Silva; Atilio Gameiro; Marco Gomes; Joao Vilela ;
PUBLISHED: 2017, SOURCE: WIRELESS COMMUNICATIONS & MOBILE COMPUTING, VOLUME: 2017, PAGES: 1-10
INDEXED IN: Scopus WOS CrossRef: 2
1131
TITLE: Journalistic Relevance Classification in Social Network Messages: an Exploratory Approach
AUTHORS: Miguel Sandim ; Paula Fortuna ; Alvaro Figueira ; Luciana Oliveira ;
PUBLISHED: 2017, SOURCE: 5th International Workshop on Complex Networks and their Applications (COMPLEX NETWORKS) in COMPLEX NETWORKS & THEIR APPLICATIONS V, VOLUME: 693, PAGES: 631-642
INDEXED IN: Scopus WOS DBLP CrossRef: 3
1132
TITLE: Kidney exchange simulation and optimization
AUTHORS: Nicolau Santos ; Paolo Tubertini; Ana Viana ; Joao Pedro Pedroso ;
PUBLISHED: 2017, SOURCE: JOURNAL OF THE OPERATIONAL RESEARCH SOCIETY, VOLUME: 68, ISSUE: 12, PAGES: 1521-1532
INDEXED IN: Scopus WOS DBLP CrossRef: 22
1133
TITLE: Labeled Homomorphic Encryption - Scalable and Privacy-Preserving Processing of Outsourced Data
AUTHORS: Manuel Barbosa ; Dario Catalano; Dario Fiore;
PUBLISHED: 2017, SOURCE: 22nd European Symposium on Research in Computer Security, ESORICS 2017 in Computer Security - ESORICS 2017 - 22nd European Symposium on Research in Computer Security, Oslo, Norway, September 11-15, 2017, Proceedings, Part I, VOLUME: 10492, PAGES: 146-166
INDEXED IN: Scopus DBLP CrossRef: 16
1134
TITLE: Labeled Homomorphic Encryption: Scalable and Privacy-Preserving Processing of Outsourced Data
AUTHORS: Manuel Barbosa ; Dario Catalano; Dario Fiore;
PUBLISHED: 2017, SOURCE: IACR Cryptology ePrint Archive, VOLUME: 2017, PAGES: 326
INDEXED IN: DBLP
1135
TITLE: Landscape of X chromosome inactivation across human tissues  Full Text
AUTHORS: Taru Tukiainen; Alexandra-Chloé Villani; Angela Yen; Manuel A Rivas; Jamie L Marshall; Rahul Satija; Matt Aguirre; Laura Gauthier; Mark Fleharty; Andrew Kirby; Beryl B Cummings; Stephane E Castel; Konrad J Karczewski; François Aguet; Andrea Byrnes; François Aguet; Kristin G Ardlie; Beryl B Cummings; Ellen T Gelfand; Gad Getz; Kane Hadley; Robert E Handsaker; Katherine H Huang; Seva Kashin; Konrad J Karczewski; Monkol Lek; Xiao Li; Daniel G MacArthur; Jared L Nedzel; Duyen T Nguyen; Michael S Noble; Ayellet V Segrè; Casandra A Trowbridge; Taru Tukiainen; Nathan S Abell; Brunilda Balliu; Ruth Barshir; Omer Basha; Alexis Battle; Gireesh K Bogu; Andrew Brown; Christopher D Brown; Stephane E Castel; Lin S Chen; Colby Chiang; Donald F Conrad; Nancy J Cox; Farhan N Damani; Joe R Davis; Olivier Delaneau; Emmanouil T Dermitzakis; Barbara E Engelhardt; Eleazar Eskin; Pedro G Ferreira ; Laure Frésard; Eric R Gamazon; Diego Garrido-Martín; Ariel D H Gewirtz; Genna Gliner; Michael J Gloudemans; Roderic Guigo; Ira M Hall; Buhm Han; Yuan He; Farhad Hormozdiari; Cedric Howald; Hae Kyung Im; Brian Jo; Eun Yong Kang; Yungil Kim; Sarah Kim-Hellmuth; Tuuli Lappalainen; Gen Li; Xin Li; Boxiang Liu; Serghei Mangul; Mark I McCarthy; Ian C McDowell; Pejman Mohammadi; Jean Monlong; Stephen B Montgomery; Manuel Muñoz-Aguirre; Anne W Ndungu; Dan L Nicolae; Andrew B Nobel; Meritxell Oliva; Halit Ongen; John J Palowitch; Nikolaos Panousis; Panagiotis Papasaikas; YoSon Park; Princy Parsana; Anthony J Payne; Christine B Peterson; Jie Quan; Ferran Reverter; Chiara Sabatti; Ashis Saha; Michael Sammeth; Alexandra J Scott; Andrey A Shabalin; Reza Sodaei; Matthew Stephens; Barbara E Stranger; Benjamin J Strober; Jae Hoon Sul; Emily K Tsang; Sarah Urbut; Martijn van de Bunt; Gao Wang; Xiaoquan Wen; Fred A Wright; Hualin S Xi; Esti Yeger-Lotem; Zachary Zappala; Judith B Zaugg; Yi-Hui Zhou; Joshua M Akey; Daniel Bates; Joanne Chan; Lin S Chen; Melina Claussnitzer; Kathryn Demanelis; Morgan Diegel; Jennifer A Doherty; Andrew P Feinberg; Marian S Fernando; Jessica Halow; Kasper D Hansen; Eric Haugen; Peter F Hickey; Lei Hou; Farzana Jasmine; Ruiqi Jian; Lihua Jiang; Audra Johnson; Rajinder Kaul; Manolis Kellis; Muhammad G Kibriya; Kristen Lee; Jin Billy Li; Qin Li; Xiao Li; Jessica Lin; Shin Lin; Sandra Linder; Caroline Linke; Yaping Liu; Matthew T Maurano; Benoit Molinie; Stephen B Montgomery; Jemma Nelson; Fidencio J Neri; Meritxell Oliva; Yongjin Park; Brandon L Pierce; Nicola J Rinaldi; Lindsay F Rizzardi; Richard Sandstrom; Andrew Skol; Kevin S Smith; Michael P Snyder; John Stamatoyannopoulos; Barbara E Stranger; Hua Tang; Emily K Tsang; Li Wang; Meng Wang; Nicholas Van Wittenberghe; Fan Wu; Rui Zhang; Concepcion R Nierras; Philip A Branton; Latarsha J Carithers; Ping Guan; Helen M Moore; Abhi Rao; Jimmie B Vaught; Sarah E Gould; Nicole C Lockart; Casey Martin; Jeffery P Struewing; Simona Volpi; Anjene M Addington; Susan E Koester; Roger R Little; Lori E Brigham; Richard Hasz; Marcus Hunter; Christopher Johns; Mark Johnson; Gene Kopen; William F Leinweber; John T Lonsdale; Alisa McDonald; Bernadette Mestichelli; Kevin Myer; Brian Roe; Michael Salvatore; Saboor Shad; Jeffrey A Thomas; Gary Walters; Michael Washington; Joseph Wheeler; Jason Bridge; Barbara A Foster; Bryan M Gillard; Ellen Karasik; Rachna Kumar; Mark Miklos; Michael T Moser; Scott D Jewell; Robert G Montroy; Daniel C Rohrer; Dana R Valley; David A Davis; Deborah C Mash; Anita H Undale; Anna M Smith; David E Tabor; Nancy V Roche; Jeffrey A McLean; Negin Vatanian; Karna L Robinson; Leslie Sobin; Mary E Barcus; Kimberly M Valentino; Liqun Qi; Steven Hunter; Pushpa Hariharan; Shilpi Singh; Ki Sung Um; Takunda Matose; Maria M Tomaszewski; Laura K Barker; Maghboeba Mosavel; Laura A Siminoff; Heather M Traino; Paul Flicek; Thomas Juettemann; Magali Ruffier; Dan Sheppard; Kieron Taylor; Stephen J Trevanion; Daniel R Zerbino; Brian Craft; Mary Goldman; Maximilian Haeussler; James J Kent; Christopher M Lee; Benedict Paten; Kate R Rosenbloom; John Vivian; Jingchun Zhu; Tuuli Lappalainen; Aviv Regev; Kristin G Ardlie; Nir Hacohen; Daniel G MacArthur; ...More
PUBLISHED: 2017, SOURCE: Nature, VOLUME: 550, ISSUE: 7675, PAGES: 244-248
INDEXED IN: Scopus CrossRef: 948
1136
TITLE: Learning influential genes on cancer gene expression data with stacked denoising autoencoders
AUTHORS: Vitor Teixeira; Rui Camacho ; Pedro G Ferreira ;
PUBLISHED: 2017, SOURCE: IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM) in 2017 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), VOLUME: 2017-January, PAGES: 1201-1205
INDEXED IN: Scopus WOS DBLP CrossRef: 15
1137
TITLE: Learning Through Utility Optimization in Regression Tasks
AUTHORS: Branco, P ; Torgo, L ; Ribeiro, RP ; Frank, E; Pfahringer, B; Rau, MM;
PUBLISHED: 2017, SOURCE: 4th IEEE / ACM / ASA International Conference on Data Science and Advanced Analytics (DSAA) in 2017 IEEE INTERNATIONAL CONFERENCE ON DATA SCIENCE AND ADVANCED ANALYTICS (DSAA), VOLUME: 2018-January, PAGES: 30-39
INDEXED IN: Scopus WOS DBLP CrossRef: 3
1138
TITLE: Learning with Imbalanced Domains: Preface
AUTHORS: Luís Torgo ; Bartosz Krawczyk; Paula Branco ; Nuno Moniz ;
PUBLISHED: 2017, SOURCE: First International Workshop on Learning with Imbalanced Domains: Theory and Applications, LIDTA@PKDD/ECML 2017, 22 September 2017, Skopje, Macedonia, VOLUME: 74, PAGES: 1-6
INDEXED IN: DBLP
1139
TITLE: Managing Diabetes: Counselling Supported by User Data in a Mobile Platform PDF
AUTHORS: Diogo Machado; Inês Dutra ; Pedro Brandão ; Vítor Santos Costa ;
PUBLISHED: 2017, SOURCE: 2017 Doctoral Consortium, Challenge, Industry Track, Tutorials and Posters @ RuleML+RR 2017, RuleML+RR 2017 in Proceedings of the Doctoral Consortium, Challenge, Industry Track, Tutorials and Posters @ RuleML+RR 2017 hosted by International Joint Conference on Rules and Reasoning 2017 (RuleML+RR 2017), London, UK, July 11-15, 2017., VOLUME: 1875
INDEXED IN: Scopus DBLP
1140
TITLE: Managing Diabetes: Pattern Discovery and Counselling supported by user data in a mobile platform
AUTHORS: Diogo Machado; Tiago Paiva; Ines Dutra ; Vitor Santos Costa ; Pedro Brandao ;
PUBLISHED: 2017, SOURCE: IEEE Symposium on Computers and Communications (ISCC) in 2017 IEEE SYMPOSIUM ON COMPUTERS AND COMMUNICATIONS (ISCC), PAGES: 296-299
INDEXED IN: Scopus WOS DBLP CrossRef: 5

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