Hugo López Fernández
AuthID: R-00H-4BF
1
TITLE: Predicting Which Mitophagy Proteins Are Dysregulated in Spinocerebellar Ataxia Type 3 (SCA3) Using the Auto-p2docking Pipeline Full Text
AUTHORS: Vieira, Jorge ; Barros, Mariana; Lopez Fernandez, Hugo; Glez Pena, Daniel; Nogueira Rodriguez, Alba; Vieira, Cristina P. ;
PUBLISHED: 2025, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 26, ISSUE: 3
AUTHORS: Vieira, Jorge ; Barros, Mariana; Lopez Fernandez, Hugo; Glez Pena, Daniel; Nogueira Rodriguez, Alba; Vieira, Cristina P. ;
PUBLISHED: 2025, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 26, ISSUE: 3
2
TITLE: PolyDeep Advance 1: Clinical Validation of a Computer-Aided Detection System for Colorectal Polyp Detection with a Second Observer Design Full Text
AUTHORS: Davila Pinon, Pedro; Pedrido, Teresa; Diez Martin, Astrid Irene; Herrero, Jesus; Puga, Manuel; Rivas, Laura; Sanchez, Eloy; Zarraquinos, Sara; Pin, Noel; Vega, Pablo; Soto, Santiago; Remedios, David; Dominguez Carbajales, Ruben; Fdez Riverola, Florentino; Nogueira Rodriguez, Alba; Glez Pena, Daniel; Reboiro Jato, Miguel; Lopez Fernandez, Hugo; Cubiella, Joaquin;
PUBLISHED: 2025, SOURCE: DIAGNOSTICS, VOLUME: 15, ISSUE: 4
AUTHORS: Davila Pinon, Pedro; Pedrido, Teresa; Diez Martin, Astrid Irene; Herrero, Jesus; Puga, Manuel; Rivas, Laura; Sanchez, Eloy; Zarraquinos, Sara; Pin, Noel; Vega, Pablo; Soto, Santiago; Remedios, David; Dominguez Carbajales, Ruben; Fdez Riverola, Florentino; Nogueira Rodriguez, Alba; Glez Pena, Daniel; Reboiro Jato, Miguel; Lopez Fernandez, Hugo; Cubiella, Joaquin;
PUBLISHED: 2025, SOURCE: DIAGNOSTICS, VOLUME: 15, ISSUE: 4
INDEXED IN: 
Scopus 
WOS
Scopus WOS3
TITLE: PPI Prediction from Sequences via Transfer Learning on Balanced but yet Biased Datasets: An Open Problem
AUTHORS: Alba Nogueira Rodríguez; Daniel Glez Peña; Cristina Vieira; Jorge Vieira ; Hugo López Fernández;
PUBLISHED: 2025, SOURCE: 18th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2024 in Lecture Notes in Networks and Systems, VOLUME: 1350 LNNS
AUTHORS: Alba Nogueira Rodríguez; Daniel Glez Peña; Cristina Vieira; Jorge Vieira ; Hugo López Fernández;
PUBLISHED: 2025, SOURCE: 18th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2024 in Lecture Notes in Networks and Systems, VOLUME: 1350 LNNS
4
TITLE: EvoPPI 2: A Web and Local Platform for the Comparison of Protein–Protein Interaction Data from Multiple Sources from the Same and Distinct Species
AUTHORS: Reboiro Jato, M; Vieira, J ; Rocha, S; Sousa, AD; López Fernández, H; Vieira, CP;
PUBLISHED: 2023, SOURCE: 16th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2022 in Lecture Notes in Networks and Systems, VOLUME: 553
AUTHORS: Reboiro Jato, M; Vieira, J ; Rocha, S; Sousa, AD; López Fernández, H; Vieira, CP;
PUBLISHED: 2023, SOURCE: 16th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2022 in Lecture Notes in Networks and Systems, VOLUME: 553
5
TITLE: On the Reproducibility of MiRNA-Seq Differential Expression Analyses in Neuropsychiatric Diseases
AUTHORS: Perez Rodriguez, Daniel; Lopez Fernandez, Hugo; Agis Balboa, Roberto C.;
PUBLISHED: 2022, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, PACBB 2021, VOLUME: 325
AUTHORS: Perez Rodriguez, Daniel; Lopez Fernandez, Hugo; Agis Balboa, Roberto C.;
PUBLISHED: 2022, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, PACBB 2021, VOLUME: 325
INDEXED IN: WOS
WOS6
TITLE: Inferences on Mycobacterium Leprae Host Immune Response Escape and Antibiotic Resistance Using Genomic Data and GenomeFastScreen
AUTHORS: López Fernández, H; Vieira, CP; Fdez Riverola, F; Reboiro Jato, M; Vieira, J ;
PUBLISHED: 2021, SOURCE: 14th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2020 in Advances in Intelligent Systems and Computing, VOLUME: 1240 AISC
AUTHORS: López Fernández, H; Vieira, CP; Fdez Riverola, F; Reboiro Jato, M; Vieira, J ;
PUBLISHED: 2021, SOURCE: 14th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2020 in Advances in Intelligent Systems and Computing, VOLUME: 1240 AISC
7
TITLE: Application of miRNA-seq in neuropsychiatry: A methodological perspective Full Text
AUTHORS: Perez Rodriguez, D; Lopez Fernandez, H; Agis Balboa, RC;
PUBLISHED: 2021, SOURCE: COMPUTERS IN BIOLOGY AND MEDICINE, VOLUME: 135
AUTHORS: Perez Rodriguez, D; Lopez Fernandez, H; Agis Balboa, RC;
PUBLISHED: 2021, SOURCE: COMPUTERS IN BIOLOGY AND MEDICINE, VOLUME: 135
INDEXED IN: WOS
WOS8
TITLE: Inferring Positive Selection in Large Viral Datasets
AUTHORS: Lopez Fernandez, H; Duque, P; Vazquez, N; Fdez Riverola, F; Reboiro Jato, M; Vieira, CP ; Vieira, J ;
PUBLISHED: 2020, SOURCE: 13th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOLUME: 1005
AUTHORS: Lopez Fernandez, H; Duque, P; Vazquez, N; Fdez Riverola, F; Reboiro Jato, M; Vieira, CP ; Vieira, J ;
PUBLISHED: 2020, SOURCE: 13th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOLUME: 1005
9
TITLE: An RNA-seq Based Machine Learning Approach Identifies Latent Tuberculosis Patients With an Active Tuberculosis Profile Full Text
AUTHORS: Olivia Estevez; Luis Anibarro; Elina Garet; Angeles Pallares; Laura Barcia; Laura Calvino; Cremildo Maueia; Tufaria Mussa; Florentino Fdez Riverola; Daniel Glez Pena; Miguel Reboiro Jato; Hugo Lopez Fernandez; Nuno A Fonseca; Rajko Reljic; Africa Gonzalez Fernandez;
PUBLISHED: 2020, SOURCE: FRONTIERS IN IMMUNOLOGY, VOLUME: 11
AUTHORS: Olivia Estevez; Luis Anibarro; Elina Garet; Angeles Pallares; Laura Barcia; Laura Calvino; Cremildo Maueia; Tufaria Mussa; Florentino Fdez Riverola; Daniel Glez Pena; Miguel Reboiro Jato; Hugo Lopez Fernandez; Nuno A Fonseca; Rajko Reljic; Africa Gonzalez Fernandez;
PUBLISHED: 2020, SOURCE: FRONTIERS IN IMMUNOLOGY, VOLUME: 11
INDEXED IN: WOS
WOS10
TITLE: Bioinformatics Protocols for Quickly Obtaining Large-Scale Data Sets for Phylogenetic Inferences Full Text
AUTHORS: Lopez Fernandez, H; Duque, P; Henriques, S; Vazquez, N; Fdez Riverola, F; Vieira, CP; Reboiro Jato, M; Vieira, J ;
PUBLISHED: 2019, SOURCE: INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES, VOLUME: 11, ISSUE: 1
AUTHORS: Lopez Fernandez, H; Duque, P; Henriques, S; Vazquez, N; Fdez Riverola, F; Vieira, CP; Reboiro Jato, M; Vieira, J ;
PUBLISHED: 2019, SOURCE: INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES, VOLUME: 11, ISSUE: 1
