Jorge Manuel de Sousa Basto Vieira


AuthID: R-000-7S2

Confirmed Publications: 126



1
TITLE: GULO Evolution in Bats: A Genomic Approach
AUTHORS: Cristina Vieira ; Hugo López Fernández; Miguel Reboiro Jato; Jorge Vieira ;
PUBLISHED: 2026, SOURCE: 19th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2025 in Lecture Notes in Networks and Systems, VOLUME: 1720 LNNS
INDEXED IN: Scopus CrossRef
IN MY: ORCID
2
TITLE: Simplifying Bioinformatics Analyses with docknrun
AUTHORS: Miguel Reboiro Jato; Diogo Adão; Pablo González González; Cristina Vieira; Hugo López Fernández; Ricardo Soares; Jorge Vieira ;
PUBLISHED: 2026, SOURCE: 19th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2025 in Lecture Notes in Networks and Systems, VOLUME: 1720 LNNS
INDEXED IN: Scopus CrossRef
IN MY: ORCID
3
TITLE: PPI Prediction from Sequences via Transfer Learning on Balanced but yet Biased Datasets: An Open Problem
AUTHORS: Alba Nogueira Rodríguez; Daniel Glez Peña; Cristina Vieira; Jorge Vieira ; Hugo López Fernández;
PUBLISHED: 2025, SOURCE: 18th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2024 in Lecture Notes in Networks and Systems, VOLUME: 1350 LNNS
INDEXED IN: Scopus CrossRef: 3
IN MY: ORCID
4
TITLE: Predicting Which Mitophagy Proteins Are Dysregulated in Spinocerebellar Ataxia Type 3 (SCA3) Using the Auto-p2docking Pipeline  Full Text
AUTHORS: Vieira, Jorge ; Barros, Mariana; Lopez Fernandez, Hugo; Glez Pena, Daniel; Nogueira Rodriguez, Alba; Vieira, Cristina P. ;
PUBLISHED: 2025, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 26, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef
IN MY: ORCID | CIÊNCIAVITAE
5
TITLE: Towards a more accurate and reliable evaluation of machine learning protein-protein interaction prediction model performance in the presence of unavoidable dataset biases
AUTHORS: Nogueira Rodriguez, Alba; Glez Pena, Daniel; Vieira, Cristina P. ; Vieira, Jorge ; Lopez Fernandez, Hugo;
PUBLISHED: 2025, SOURCE: JOURNAL OF INTEGRATIVE BIOINFORMATICS, VOLUME: 22, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef
IN MY: ORCID
6
TITLE: Auto-phylo v2 and auto-phylo-pipeliner: building advanced, flexible, and reusable pipelines for phylogenetic inferences, estimation of variability levels and identification of positively selected amino acid sites
AUTHORS: Lopez Fernandez, Hugo; Pinto, Miguel; Vieira, Cristina P. ; Duque, Pedro; Reboiro Jato, Miguel; Vieira, Jorge ;
PUBLISHED: 2024, SOURCE: JOURNAL OF INTEGRATIVE BIOINFORMATICS, VOLUME: 21, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 1
7
TITLE: Inferences on the evolution of the ascorbic acid synthesis pathway in insects using Phylogenetic Tree Collapser (PTC), a tool for the automated collapsing of phylogenetic trees using taxonomic information
AUTHORS: Glez Pena, Daniel; Lopez Fernandez, Hugo; Duque, Pedro; Vieira, Cristina P.; Vieira, Jorge ;
PUBLISHED: 2024, SOURCE: JOURNAL OF INTEGRATIVE BIOINFORMATICS, VOLUME: 21, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 1
8
TITLE: Multiple Lines of Evidence Support 199 SARS-CoV-2 Positively Selected Amino Acid Sites  Full Text
AUTHORS: Ferreira, Pedro ; Soares, Ricardo; Lopez Fernandez, Hugo; Vazquez, Noe; Reboiro Jato, Miguel; Vieira, Cristina P.; Vieira, Jorge ;
PUBLISHED: 2024, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 25, ISSUE: 4
INDEXED IN: Scopus WOS CrossRef: 2
IN MY: CIÊNCIAVITAE
9
TITLE: SEDA 2024 update: enhancing the SEquence DAtaset builder for seamless integration into automated data analysis pipelines  Full Text
AUTHORS: Reboiro Jato, Miguel; Perez Rodriguez, Daniel; Da Silva, Miguel Jose; Vila Fernandez, David; Vieira, Cristina P.; Vieira, Jorge ; Lopez Fernandez, Hugo;
PUBLISHED: 2024, SOURCE: BMC BIOINFORMATICS, VOLUME: 25, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 2
IN MY: CIÊNCIAVITAE
10
Page 1 of 13. Total results: 126.

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