Ana Barroso Abecasis
AuthID: R-000-JSV
21
TITLE: VIRULIGN: fast codon-correct alignment and annotation of viral genomes Full Text
AUTHORS: Pieter J K Libin; Koen Deforche; Ana B Abecasis; Kristof Theys;
PUBLISHED: 2019, SOURCE: BIOINFORMATICS, VOLUME: 35, ISSUE: 10
AUTHORS: Pieter J K Libin; Koen Deforche; Ana B Abecasis; Kristof Theys;
PUBLISHED: 2019, SOURCE: BIOINFORMATICS, VOLUME: 35, ISSUE: 10
INDEXED IN: 
Scopus 
WOS
Scopus WOS22
TITLE: A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes Full Text
AUTHORS: Vagner Fonseca; Pieter J K Libin; Kristof Theys; Nuno R Faria; Marcio R T Nunes; Maria I Restovic; Murilo Freire; Marta Giovanetti; Lize Cuypers; Ann Nowe; Ana Abecasis; Koen Deforche; Gilberto A Santiago; Isadora C de Siqueira; Emmanuel J San; Kaliane C B Machado; Vasco Azevedo; Ana Maria Bispo de Filippis; Rivaldo Venancio da Cunha; Oliver G Pybus; ...More
PUBLISHED: 2019, SOURCE: PLOS NEGLECTED TROPICAL DISEASES, VOLUME: 13, ISSUE: 5
AUTHORS: Vagner Fonseca; Pieter J K Libin; Kristof Theys; Nuno R Faria; Marcio R T Nunes; Maria I Restovic; Murilo Freire; Marta Giovanetti; Lize Cuypers; Ann Nowe; Ana Abecasis; Koen Deforche; Gilberto A Santiago; Isadora C de Siqueira; Emmanuel J San; Kaliane C B Machado; Vasco Azevedo; Ana Maria Bispo de Filippis; Rivaldo Venancio da Cunha; Oliver G Pybus; ...More
PUBLISHED: 2019, SOURCE: PLOS NEGLECTED TROPICAL DISEASES, VOLUME: 13, ISSUE: 5
INDEXED IN: Scopus WOS
Scopus WOS23
TITLE: Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology
AUTHORS: Tetyana I Vasylyeva; Louis du Plessis; Andrea C Pineda Pena; Denise Kuehnert; Philippe Lemey; Anne Mieke Vandamme; Perpetua Gomes; Ricardo J Camacho; Oliver G Pybus; Ana B Abecasis; Nuno R Faria;
PUBLISHED: 2019, SOURCE: JOURNAL OF INFECTIOUS DISEASES, VOLUME: 220, ISSUE: 2
AUTHORS: Tetyana I Vasylyeva; Louis du Plessis; Andrea C Pineda Pena; Denise Kuehnert; Philippe Lemey; Anne Mieke Vandamme; Perpetua Gomes; Ricardo J Camacho; Oliver G Pybus; Ana B Abecasis; Nuno R Faria;
PUBLISHED: 2019, SOURCE: JOURNAL OF INFECTIOUS DISEASES, VOLUME: 220, ISSUE: 2
INDEXED IN: Scopus WOS
Scopus WOS24
TITLE: An Evolutionary Model-Based Approach To Quantify the Genetic Barrier to Drug Resistance in Fast-Evolving Viruses and Its Application to HIV-1 Subtypes and Integrase Inhibitors
AUTHORS: Kristof Theys; Pieter J K Libin; Kristel Van Laethem; Ana B Abecasis;
PUBLISHED: 2019, SOURCE: ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, VOLUME: 63, ISSUE: 8
AUTHORS: Kristof Theys; Pieter J K Libin; Kristel Van Laethem; Ana B Abecasis;
PUBLISHED: 2019, SOURCE: ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, VOLUME: 63, ISSUE: 8
INDEXED IN: Scopus WOS
Scopus WOS25
TITLE: Drivers of HIV-1 transmission: The Portuguese case
AUTHORS: Pineda Peña, AC; Pingarilho, M; Li, G; Vrancken, B; Libin, P; Gomes, P; Camacho, RJ; Theys, K; Abecasis, AB;
PUBLISHED: 2019, SOURCE: PLoS ONE, VOLUME: 14, ISSUE: 9
AUTHORS: Pineda Peña, AC; Pingarilho, M; Li, G; Vrancken, B; Libin, P; Gomes, P; Camacho, RJ; Theys, K; Abecasis, AB;
PUBLISHED: 2019, SOURCE: PLoS ONE, VOLUME: 14, ISSUE: 9
INDEXED IN: Scopus
Scopus26
TITLE: Drivers of HIV-1 transmission: The Portuguese case Full Text
AUTHORS: Andrea Clemencia Pineda Pena; Marta Pingarilho; Guangdi D Li; Bram Vrancken; Pieter Libin; Perpetua Gomes; Ricardo Jorge Camacho; Kristof Theys; Ana Barroso Abecasis;
PUBLISHED: 2019, SOURCE: PLOS ONE, VOLUME: 14, ISSUE: 9
AUTHORS: Andrea Clemencia Pineda Pena; Marta Pingarilho; Guangdi D Li; Bram Vrancken; Pieter Libin; Perpetua Gomes; Ricardo Jorge Camacho; Kristof Theys; Ana Barroso Abecasis;
PUBLISHED: 2019, SOURCE: PLOS ONE, VOLUME: 14, ISSUE: 9
INDEXED IN: WOS
WOS27
TITLE: The impact of HIV-1 within-host evolution on transmission dynamics Full Text
AUTHORS: Kristof Theys; Pieter Libin; Andrea Clemencia Pineda Pena; Ann Nowe; Anne Mieke Vandamme; Ana B Abecasis;
PUBLISHED: 2018, SOURCE: CURRENT OPINION IN VIROLOGY, VOLUME: 28
AUTHORS: Kristof Theys; Pieter Libin; Andrea Clemencia Pineda Pena; Ann Nowe; Anne Mieke Vandamme; Ana B Abecasis;
PUBLISHED: 2018, SOURCE: CURRENT OPINION IN VIROLOGY, VOLUME: 28
INDEXED IN: Scopus WOS
Scopus WOS28
TITLE: HIV-1 Infection in Cyprus, the Eastern Mediterranean European Frontier: A Densely Sampled Transmission Dynamics Analysis from 1986 to 2012 Full Text
AUTHORS: Andrea Clemencia Pineda Pena; Kristof Theys; Dora C Stylianou; Ioannis Demetriades; Ana B Abecasis; Leondios G Kostrikis;
PUBLISHED: 2018, SOURCE: SCIENTIFIC REPORTS, VOLUME: 8
AUTHORS: Andrea Clemencia Pineda Pena; Kristof Theys; Dora C Stylianou; Ioannis Demetriades; Ana B Abecasis; Leondios G Kostrikis;
PUBLISHED: 2018, SOURCE: SCIENTIFIC REPORTS, VOLUME: 8
INDEXED IN: WOS
WOS29
TITLE: Phylogenetic analysis as a forensic tool in HIV transmission investigations
AUTHORS: Ana B Abecasis; Marta Pingarilho; Anne Mieke Vandamme;
PUBLISHED: 2018, SOURCE: AIDS, VOLUME: 32, ISSUE: 5
AUTHORS: Ana B Abecasis; Marta Pingarilho; Anne Mieke Vandamme;
PUBLISHED: 2018, SOURCE: AIDS, VOLUME: 32, ISSUE: 5
INDEXED IN: Scopus WOS
Scopus WOS30
TITLE: Molecular footprints of selective pressure in the neuraminidase gene of currently circulating human influenza subtypes and lineages Full Text
AUTHORS: Vanessa Correia; Ana B Abecasis; Helena Rebelo de Andrade;
PUBLISHED: 2018, SOURCE: VIROLOGY, VOLUME: 522
AUTHORS: Vanessa Correia; Ana B Abecasis; Helena Rebelo de Andrade;
PUBLISHED: 2018, SOURCE: VIROLOGY, VOLUME: 522
INDEXED IN: Scopus WOS
Scopus WOS