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TITLE: PPI Prediction from Sequences via Transfer Learning on Balanced but yet Biased Datasets: An Open Problem
AUTHORS: Alba Nogueira Rodríguez; Daniel Glez Peña; Cristina Vieira; Jorge Vieira ; Hugo López Fernández;
PUBLISHED: 2025, SOURCE: 18th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2024 in Lecture Notes in Networks and Systems, VOLUME: 1350 LNNS
INDEXED IN: Scopus CrossRef
IN MY: ORCID
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TITLE: Predicting Which Mitophagy Proteins Are Dysregulated in Spinocerebellar Ataxia Type 3 (SCA3) Using the Auto-p2docking Pipeline  Full Text
AUTHORS: Vieira, Jorge ; Barros, Mariana; Lopez Fernandez, Hugo; Glez Pena, Daniel; Nogueira Rodriguez, Alba; Vieira, Cristina P.;
PUBLISHED: 2025, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 26, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef
IN MY: ORCID
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TITLE: Towards a more accurate and reliable evaluation of machine learning protein-protein interaction prediction model performance in the presence of unavoidable dataset biases
AUTHORS: Nogueira Rodriguez, Alba; Glez Pena, Daniel; Vieira, Cristina P. ; Vieira, Jorge ; Lopez Fernandez, Hugo;
PUBLISHED: 2025, SOURCE: JOURNAL OF INTEGRATIVE BIOINFORMATICS
INDEXED IN: WOS CrossRef
IN MY: ORCID
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TITLE: Isolation and characterization of soil cyanobacteria and microalgae and evaluation of their potential as plant biostimulants  Full Text
AUTHORS: Roque, Jessica; Brito, Angela; Rocha, Mariana; Pissarra, Joao; Nunes, Telma; Bessa, Marcia; Vieira, Jorge ; Vieira, Cristina P.; Melo, Paula ; Tamagnini, Paula ;
PUBLISHED: 2023, SOURCE: PLANT AND SOIL, VOLUME: 493, ISSUE: 1-2
INDEXED IN: Scopus WOS CrossRef
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TITLE: On the identification of potential novel therapeutic targets for spinocerebellar ataxia type 1 (SCA1) neurodegenerative disease using EvoPPI3
AUTHORS: Sousa, Andre; Rocha, Sara; Vieira, Jorge ; Reboiro Jato, Miguel; Lopez Fernandez, Hugo; Vieira, Cristina P. ;
PUBLISHED: 2023, SOURCE: JOURNAL OF INTEGRATIVE BIOINFORMATICS, VOLUME: 20, ISSUE: 2
INDEXED IN: WOS CrossRef
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TITLE: A new cyanobacterial species with a protective effect on lettuce grown under salinity stress: Envisaging sustainable agriculture practices  Full Text
AUTHORS: Brito, A; Rocha, M; Kastovsky, J; Vieira, J ; Vieira, CP ; Ramos, V; Correia, M; Santos, M; Mota, R; Roque, J; Pissarra, J; Melo, P ; Tamagnini, P ;
PUBLISHED: 2022, SOURCE: JOURNAL OF APPLIED PHYCOLOGY, VOLUME: 34, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 8
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