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211

TITLE: Model transformation of metabolic networks using a Petri net based framework
AUTHORS: Machado, D; Costa, RS; Rocha, M ; Rocha, I; Tidor, B; Ferreira, EC ;
PUBLISHED: 2010, SOURCE: Recent Advances in Petri Nets and Concurrency, RAPNeC 2010 - Workshops of the 31st International Conference on Application and Theory of Petri Nets and Other Models of Concurrency, PETRI NETS 2010 and the 10th int. conf. ACSD 2010 in CEUR Workshop Proceedings, VOLUME: 827

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212

TITLE: OptFlux: an open-source software platform for in silico metabolic engineering Full Text
AUTHORS: Isabel Rocha ; Paulo Maia; Pedro Evangelista; Paulo Vilaca; Simao Soares; Jose P Pinto ; Jens Nielsen; Kiran R Patil; Eugenio C Ferreira ; Miguel Rocha ;
PUBLISHED: 2010, SOURCE: BMC SYSTEMS BIOLOGY, VOLUME: 4, ISSUE: 1

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213

TITLE: Parallelisation Service in the AspectGrid Framework
AUTHORS: Jorge Pinho; Matheus Almeida; Miguel Rocha ; Joao L Sobral ;
PUBLISHED: 2010, SOURCE: 4th Iberian Grid Infrastructure Conference (IBERGRID) in IBERGRID: 4TH IBERIAN GRID INFRASTRUCTURE CONFERENCE PROCEEDINGS

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214

TITLE: Pluggable Parallelization of Evolutionary Algorithms Applied to the Optimization of Biological Processes
AUTHORS: Jorge Pinho; Miguel Rocha ; Joao L Sobral ;
PUBLISHED: 2010, SOURCE: 18th Euromicro International Conference on Parallel, Distributed and Network-Based Processing (PDP) in PROCEEDINGS OF THE 18TH EUROMICRO CONFERENCE ON PARALLEL, DISTRIBUTED AND NETWORK-BASED PROCESSING

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215

TITLE: Spam Email Filtering Using Network-Level Properties
AUTHORS: Paulo Cortez ; Andre Correia; Pedro Sousa ; Miguel Rocha ; Miguel Rio;
PUBLISHED: 2010, SOURCE: 10th Industrial Conference on Data Mining in ADVANCES IN DATA MINING: APPLICATIONS AND THEORETICAL ASPECTS, VOLUME: 6171

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216

TITLE: @Note: A workbench for Biomedical Text Mining Full Text
AUTHORS: Lourenco, A; Carreira, R; Carneiro, S ; Maia, P; Glez Pena, D; Fdez Riverola, F; Ferreira, EC ; Rocha, I ; Rocha, M ;
PUBLISHED: 2009, SOURCE: JOURNAL OF BIOMEDICAL INFORMATICS, VOLUME: 42, ISSUE: 4

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217

TITLE: A Critical Review on Modelling Formalisms and Simulation Tools in Computational Biosystems
AUTHORS: Daniel Machado; Rafael S Costa ; Miguel Rocha ; Isabel Rocha ; Bruce Tidor; Eugenio C Ferreira ;
PUBLISHED: 2009, SOURCE: 10th International Work-Conference on Artificial Neural Networks (IWANN 2009) in DISTRIBUTED COMPUTING, ARTIFICIAL INTELLIGENCE, BIOINFORMATICS, SOFT COMPUTING, AND AMBIENT ASSISTED LIVING, PT II, PROCEEDINGS, VOLUME: 5518, ISSUE: PART 2

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218

TITLE: A Software Tool for the Simulation and Optimization of Dynamic Metabolic Models
AUTHORS: Pedro Evangelista; Isabel Rocha ; Eugenio C Ferreira ; Miguel Rocha ;
PUBLISHED: 2009, SOURCE: 10th International Work-Conference on Artificial Neural Networks (IWANN 2009) in DISTRIBUTED COMPUTING, ARTIFICIAL INTELLIGENCE, BIOINFORMATICS, SOFT COMPUTING, AND AMBIENT ASSISTED LIVING, PT II, PROCEEDINGS, VOLUME: 5518, ISSUE: PART 2

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219

TITLE: Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing
AUTHORS: Lourenco, A; Carneiro, S ; Ferreira, EC ; Carreira, R; Rocha, LM ; Glez Pena, D; Mendez, JR; Fdez Riverola, F; Diaz, F; Rocha, I ; Rocha, M ;
PUBLISHED: 2009, SOURCE: 10th International Work-Conference on Artificial Neural Networks (IWANN 2009) in DISTRIBUTED COMPUTING, ARTIFICIAL INTELLIGENCE, BIOINFORMATICS, SOFT COMPUTING, AND AMBIENT ASSISTED LIVING, PT II, PROCEEDINGS, VOLUME: 5518, ISSUE: PART 2

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220

TITLE: Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis
AUTHORS: Jose P Pinto ; Oscar Dias ; Analia Lourenco; Sonia Carneiro ; Eugenio C Ferreira ; Isabel Rocha ; Miguel Rocha ;
PUBLISHED: 2009, SOURCE: 2nd International Workshop on Practical Applications of Computational Biology and Bioinformatics (IWPACBB 08) in 2ND INTERNATIONAL WORKSHOP ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (IWPACBB 2008), VOLUME: 49

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