Oscar Manuel Lima Dias


AuthID: R-000-DYT

Confirmed Publications: 55



1
TITLE: Comparative Assessment of Protein Large Language Models for Enzyme Commission Number Prediction  Full Text
AUTHORS: Capela, Joao; Zimmermann Kogadeeva, Maria; van Dijk, Aalt D. J.; de Ridder, Dick; Dias, Oscar ; Rocha, Miguel;
PUBLISHED: 2025, SOURCE: BMC BIOINFORMATICS, VOLUME: 26, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 2
IN MY: CIÊNCIAVITAE
2
TITLE: PhageDPO: A machine-learning based computational framework for identifying phage depolymerases  Full Text
AUTHORS: Fernanda Vieira; José Duarte; Rita Domingues; Hugo Oliveira; Oscar Dias ;
PUBLISHED: 2025, SOURCE: Computers in Biology and Medicine, VOLUME: 188
INDEXED IN: Scopus CrossRef
IN MY: CIÊNCIAVITAE
3
TITLE: A diel multi-tissue genome-scale metabolic model of Vitis vinifera  Full Text
AUTHORS: Marta Sampaio; Miguel Rocha; Oscar Dias ;
PUBLISHED: 2024, SOURCE: PLOS Computational Biology, VOLUME: 20, ISSUE: 10
INDEXED IN: CrossRef: 2
IN MY: CIÊNCIAVITAE
4
TITLE: BioISO: An Objective-Oriented Application for Assisting the Curation of Genome-Scale Metabolic Models
AUTHORS: Cruz, Fernando; Capela, Joao; Ferreira, Eugenio Campos; Rocha, Miguel ; Dias, Oscar ;
PUBLISHED: 2024, SOURCE: IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOLUME: 21, ISSUE: 2
INDEXED IN: WOS CrossRef: 2
IN MY: ORCID | CIÊNCIAVITAE
5
TITLE: BioISO: An Objective-Oriented Application for Assisting the Curation of Genome-Scale Metabolic Models
AUTHORS: Fernando Cruz; Joao Capela; Eugenio Campos Ferreira ; Miguel Rocha ; Oscar Dias ;
PUBLISHED: 2024, SOURCE: IEEE/ACM Transactions on Computational Biology and Bioinformatics, VOLUME: 21, ISSUE: 2
INDEXED IN: Scopus CrossRef: 1
IN MY: ORCID | CIÊNCIAVITAE
6
TITLE: Optimization of chondroitin production in E. coli using genome scale models
AUTHORS: Couto, Marcia R.; Rodrigues, Joana L.; Braga, Adelaide; Dias, Oscar ; Rodrigues, Ligia R. ;
PUBLISHED: 2024, SOURCE: MOLECULAR SYSTEMS DESIGN & ENGINEERING, VOLUME: 9, ISSUE: 6
INDEXED IN: Scopus WOS CrossRef
IN MY: ORCID | CIÊNCIAVITAE
7
TITLE: Saccharomyces cerevisiae as a Host for Chondroitin Production
AUTHORS: Márcia R Couto; Joana L Rodrigues; Oscar Dias ; Lígia R Rodrigues ;
PUBLISHED: 2024, SOURCE: SynBio, VOLUME: 2, ISSUE: 2
INDEXED IN: CrossRef
IN MY: ORCID | CIÊNCIAVITAE
8
TITLE: Towards a genome-scale metabolic model of Dunaliella salina
AUTHORS: Cunha, Emanuel; Sousa, Vitor; Vicente, Antonio; Geada, Pedro; Dias, Oscar ;
PUBLISHED: 2024, SOURCE: 10th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE) in IFAC PAPERSONLINE, VOLUME: 58, ISSUE: 23
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: CIÊNCIAVITAE
9
TITLE: Exploring Xylella fastidiosa’s Metabolic Traits Using a GSM Model of the Phytopathogenic Bacterium
AUTHORS: Oliveira, A; Cunha, E; Silva, M; Faria, C; Dias, O ;
PUBLISHED: 2023, SOURCE: 16th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2022 in Lecture Notes in Networks and Systems, VOLUME: 553
INDEXED IN: Scopus CrossRef: 1
IN MY: ORCID | CIÊNCIAVITAE
10
Page 1 of 6. Total results: 55.

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