31
TITLE: Exploring synergies between plant metabolic modelling and machine learning
AUTHORS: Sampaio, Marta; Rocha, Miguel ; Dias, Oscar ;
PUBLISHED: 2022, SOURCE: COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, VOLUME: 20
INDEXED IN: Scopus WOS CrossRef: 9 Handle
32
TITLE: merlin, an improved framework for the reconstruction of high-quality genome-scale metabolic models  Full Text
AUTHORS: Capela, Joao; Lagoa, Davide; Rodrigues, Ruben; Cunha, Emanuel; Cruz, Fernando; Barbosa, Ana; Bastos, Jose; Lima, Diogo; Ferreira, Eugenio C. ; Rocha, Miguel ; Dias, Oscar ;
PUBLISHED: 2022, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 50, ISSUE: 11
INDEXED IN: Scopus WOS CrossRef: 18
34
TITLE: Practical Applications of Computational Biology and Bioinformatics, 16th International Conference (PACBB 2022)
AUTHORS: Florentino Fdez Riverola; Miguel P Rocha ; Simona Caraiman; Ana Belén Gil González; Mohd Saberi Mohamad;
PUBLISHED: 2022
INDEXED IN: Openlibrary
35
TITLE: Predicting the number of biochemical transformations needed to synthesize a compound
AUTHORS: Correia, Joao; Carreira, Rafael; Pereira, Vitor ; Rocha, Miguel ;
PUBLISHED: 2022, SOURCE: IEEE International Conference on Fuzzy Systems (FUZZ-IEEE) / IEEE World Congress on Computational Intelligence (IEEE WCCI) / International Joint Conference on Neural Networks (IJCNN) / IEEE Congress on Evolutionary Computation (IEEE CEC) in 2022 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN), VOLUME: 2022-July
INDEXED IN: Scopus WOS CrossRef
36
TITLE: Preface
AUTHORS: Rocha, M ; Fdez Riverola, F; Mohamad, MS; Casado Vara, R;
PUBLISHED: 2022, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2021 in Lecture Notes in Networks and Systems, VOLUME: 325 LNNS
INDEXED IN: Scopus
37
TITLE: ProPythia: A Python package for protein classification based on machine and deep learning  Full Text
AUTHORS: Sequeira, Ana Marta; Lousa, Diana; Rocha, Miguel ;
PUBLISHED: 2022, SOURCE: NEUROCOMPUTING, VOLUME: 484
INDEXED IN: Scopus WOS CrossRef: 13
38
TITLE: Reconstruction of tissue-specific genome-scale metabolic models for human cancer stem cells
AUTHORS: Barata, T; Vieira, V; Rodrigues, R; das Neves, RP; Rocha, M ;
PUBLISHED: 2022, SOURCE: COMPUTERS IN BIOLOGY AND MEDICINE, VOLUME: 142
INDEXED IN: Scopus WOS CrossRef: 6
39
TITLE: Recurrent Deep Neural Networks for Enzyme Functional Annotation
AUTHORS: Sequeira, Ana Marta; Rocha, Miguel ;
PUBLISHED: 2022, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, PACBB 2021, VOLUME: 325
INDEXED IN: Scopus WOS CrossRef: 3
40
TITLE: UPIMAPI, reCOGnizer and KEGGCharter: Bioinformatics tools for functional annotation and visualization of (meta)-omics datasets
AUTHORS: Sequeira, Joao C.; Rocha, Miguel ; Alves, M. Madalena; Salvador, Andreia F.;
PUBLISHED: 2022, SOURCE: COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, VOLUME: 20
INDEXED IN: Scopus WOS
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