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TITLE: Speeding up the detection of invasive bivalve species using environmental DNA: A Nanopore and Illumina sequencing comparison  Full Text
AUTHORS: Egeter, Bastian; Verissimo, Joana; Lopes Lima, Manuel; Chaves, Catia; Pinto, Joana; Riccardi, Nicoletta; Beja, Pedro; Fonseca, Nuno A. ;
PUBLISHED: 2022, SOURCE: MOLECULAR ECOLOGY RESOURCES
INDEXED IN: Scopus WOS CrossRef
IN MY: ORCID
2
TITLE: A Study on Burrows-Wheeler Aligner's Performance Optimization for Ancient DNA Mapping
AUTHORS: Cindy Sarmento; Sílvia Guimarães; Gülsah Merve Kilinç; Anders Götherström; Ana Elisabete Pires; Catarina Ginja ; Nuno A Fonseca ;
PUBLISHED: 2021, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2021 in Practical Applications of Computational Biology & Bioinformatics, 15th International Conference (PACBB 2021), Salamanca, Spain, 6-8 October, 2021., VOLUME: 325
INDEXED IN: Scopus DBLP CrossRef
IN MY: ORCID | DBLP
3
TITLE: Comparative Genomics of Xanthomonas euroxanthea and Xanthomonas arboricola pv. juglandis Strains Isolated from a Single Walnut Host Tree
AUTHORS: Fernandes, C; Martins, L; Teixeira, M; Blom, J; Pothier, JE; Fonseca, NA ; Tavares, F ;
PUBLISHED: 2021, SOURCE: MICROORGANISMS, VOLUME: 9, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: ORCID
4
TITLE: Complete Genome Sequence Obtained by Nanopore and Illumina Hybrid Assembly of Xanthomonas arboricola pv. juglandis CPBF 427, Isolated from Buds of a Walnut Tree
AUTHORS: Teixeira, M; Fernandes, C; Chaves, C; Pinto, J; Tavares, F ; Fonseca, NA ;
PUBLISHED: 2021, SOURCE: MICROBIOLOGY RESOURCE ANNOUNCEMENTS, VOLUME: 10, ISSUE: 10
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: ORCID
5
TITLE: DNA Barcoding of Portuguese Lacewings (Neuroptera) and Snakeflies (Raphidioptera) (Insecta, Neuropterida)  Full Text
AUTHORS: Oliveira, D; Chaves, C; Pinto, J; Pauperio, J ; Fonseca, N ; Beja, P; Ferreira, S;
PUBLISHED: 2021, SOURCE: ZOOKEYS, VOLUME: 1054, ISSUE: 1054
INDEXED IN: WOS CrossRef
IN MY: ORCID
6
TITLE: Evaluating the impact of sampling strategies and bioinformatics on ethanol-based DNA metabarcoding
AUTHORS: Filipa MS Martins; Nuno A Fonseca ; Bastian Egeter; Joana Pinto; Tiago Assunção; Cátia Chaves; Pedro Sousa; Joaquim Jesus; Pedro Beja;
PUBLISHED: 2021, SOURCE: ARPHA Conference Abstracts, VOLUME: 4
INDEXED IN: CrossRef
IN MY: ORCID
7
TITLE: Metabarcoding with MinION: Speeding up the detection of invasive aquatic species using environmental DNA and nanopore sequencing
AUTHORS: Bastian Egeter; Joana Veríssimo; Manuel Lopes-Lima; catia chaves; Joana Pinto; Nicoletta Riccardi; Pedro Beja; Nuno A Fonseca ;
PUBLISHED: 2021, SOURCE: ARPHA Conference Abstracts, VOLUME: 4
INDEXED IN: CrossRef
IN MY: ORCID
8
TITLE: Shedding Light on the African Enigma: In Vitro Testing of Homo sapiens-Helicobacter pylori Coevolution
AUTHORS: Cavadas, B; Leite, M; Pedro, N; Magalhaes, AC; Melo, J; Correia, M; Maximo, V ; Camacho, R ; Fonseca, NA ; Figueiredo, C ; Pereira, L;
PUBLISHED: 2021, SOURCE: MICROORGANISMS, VOLUME: 9, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 5
IN MY: ORCID
9
TITLE: Tumour gene expression signature in primary melanoma predicts long-term outcomes
AUTHORS: Garg, M; Couturier, DL; Nsengimana, J; Fonseca, NA ; Wongchenko, M; Yan, YB; Lauss, M; Jonsson, GB; Newton Bishop, J; Parkinson, C; Middleton, MR; Bishop, DT; McDonald, S; Stefanos, N; Tadross, J; Vergara, IA; Lo, S; Newell, F; Wilmott, JS; Thompson, JF; Long, GV; Scolyer, RA; Corrie, P; Adams, DJ; Brazma, A; Rabbie, R; ...More
PUBLISHED: 2021, SOURCE: NATURE COMMUNICATIONS, VOLUME: 12, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 6
IN MY: ORCID
10
TITLE: A user guide for the online exploration and visualization of PCAWG data
AUTHORS: Mary J Goldman; Junjun Zhang; Nuno A Fonseca ; Isidro Cortés-Ciriano; Qian Xiang; Brian Craft; Elena Piñeiro-Yáñez; Brian D O’Connor; Wojciech Bazant; Elisabet Barrera; Alfonso Muñoz-Pomer; Robert Petryszak; Anja Füllgrabe; Fatima Al-Shahrour; Maria Keays; David Haussler; John N Weinstein; Wolfgang Huber; Alfonso Valencia; Peter J Park; Irene Papatheodorou; Jingchun Zhu; Vincent Ferretti; Miguel Vazquez; ...More
PUBLISHED: 2020, SOURCE: Nature Communications, VOLUME: 11, ISSUE: 1
INDEXED IN: CrossRef: 6
IN MY: ORCID
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