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TITLE: A Study on Burrows-Wheeler Aligner's Performance Optimization for Ancient DNA Mapping
AUTHORS: Sarmento, Cindy; Guimaraes, Silvia; Kilinc, Gulsah Merve; Gotherstrom, Anders; Pires, Ana Elisabete; Ginja, Catarina ; Fonseca, Nuno A. ;
PUBLISHED: 2022, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, PACBB 2021, VOLUME: 325
INDEXED IN: Scopus WOS DBLP CrossRef
IN MY: ORCID | DBLP
2
TITLE: Author Correction: Tumour gene expression signature in primary melanoma predicts long-term outcomes
AUTHORS: Manik Garg; Dominique-Laurent Couturier; Jérémie Nsengimana; Nuno A Fonseca ; Matthew Wongchenko; Yibing Yan; Martin Lauss; Göran B Jönsson; Julia Newton-Bishop; Christine Parkinson; Mark R Middleton; Timothy T Bishop; Sarah McDonald; Nikki Stefanos; John Tadross; Ismael A Vergara; Serigne Lo; Felicity Newell; James S Wilmott; John F Thompson; Georgina V Long; Richard A Scolyer; Pippa Corrie; David J Adams; Alvis Brazma; Roy Rabbie; ...More
PUBLISHED: 2022, SOURCE: Nature Communications, VOLUME: 13, ISSUE: 1
INDEXED IN: CrossRef
IN MY: ORCID
3
TITLE: Speeding up the detection of invasive bivalve species using environmental DNA: A Nanopore and Illumina sequencing comparison  Full Text
AUTHORS: Egeter, Bastian; Verissimo, Joana; Lopes Lima, Manuel; Chaves, Catia; Pinto, Joana; Riccardi, Nicoletta; Beja, Pedro; Fonseca, Nuno A. ;
PUBLISHED: 2022, SOURCE: MOLECULAR ECOLOGY RESOURCES, VOLUME: 22, ISSUE: 6
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: ORCID
4
TITLE: Comparative Genomics of Xanthomonas euroxanthea and Xanthomonas arboricola pv. juglandis Strains Isolated from a Single Walnut Host Tree
AUTHORS: Fernandes, C; Martins, L; Teixeira, M; Blom, J; Pothier, JE; Fonseca, NA ; Tavares, F ;
PUBLISHED: 2021, SOURCE: MICROORGANISMS, VOLUME: 9, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: ORCID
5
TITLE: Complete Genome Sequence Obtained by Nanopore and Illumina Hybrid Assembly of Xanthomonas arboricola pv. juglandis CPBF 427, Isolated from Buds of a Walnut Tree
AUTHORS: Teixeira, M; Fernandes, C; Chaves, C; Pinto, J; Tavares, F ; Fonseca, NA ;
PUBLISHED: 2021, SOURCE: MICROBIOLOGY RESOURCE ANNOUNCEMENTS, VOLUME: 10, ISSUE: 10
INDEXED IN: Scopus WOS CrossRef: 1
IN MY: ORCID
6
TITLE: DNA Barcoding of Portuguese Lacewings (Neuroptera) and Snakeflies (Raphidioptera) (Insecta, Neuropterida)  Full Text
AUTHORS: Oliveira, D; Chaves, C; Pinto, J; Pauperio, J ; Fonseca, N ; Beja, P; Ferreira, S;
PUBLISHED: 2021, SOURCE: ZOOKEYS, VOLUME: 1054, ISSUE: 1054
INDEXED IN: WOS CrossRef
IN MY: ORCID
7
TITLE: Evaluating the impact of sampling strategies and bioinformatics on ethanol-based DNA metabarcoding
AUTHORS: Filipa MS Martins; Nuno A Fonseca ; Bastian Egeter; Joana Pinto; Tiago Assunção; Cátia Chaves; Pedro Sousa; Joaquim Jesus; Pedro Beja;
PUBLISHED: 2021, SOURCE: ARPHA Conference Abstracts, VOLUME: 4
INDEXED IN: CrossRef
IN MY: ORCID
8
TITLE: Metabarcoding with MinION: Speeding up the detection of invasive aquatic species using environmental DNA and nanopore sequencing
AUTHORS: Bastian Egeter; Joana Veríssimo; Manuel Lopes-Lima; catia chaves; Joana Pinto; Nicoletta Riccardi; Pedro Beja; Nuno A Fonseca ;
PUBLISHED: 2021, SOURCE: ARPHA Conference Abstracts, VOLUME: 4
INDEXED IN: CrossRef
IN MY: ORCID
9
TITLE: Shedding Light on the African Enigma: In Vitro Testing of Homo sapiens-Helicobacter pylori Coevolution
AUTHORS: Cavadas, B; Leite, M; Pedro, N; Magalhaes, AC; Melo, J; Correia, M; Maximo, V ; Camacho, R ; Fonseca, NA ; Figueiredo, C ; Pereira, L;
PUBLISHED: 2021, SOURCE: MICROORGANISMS, VOLUME: 9, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 7
IN MY: ORCID
10
TITLE: Tumour gene expression signature in primary melanoma predicts long-term outcomes
AUTHORS: Garg, M; Couturier, DL; Nsengimana, J; Fonseca, NA ; Wongchenko, M; Yan, YB; Lauss, M; Jonsson, GB; Newton Bishop, J; Parkinson, C; Middleton, MR; Bishop, DT; McDonald, S; Stefanos, N; Tadross, J; Vergara, IA; Lo, S; Newell, F; Wilmott, JS; Thompson, JF; Long, GV; Scolyer, RA; Corrie, P; Adams, DJ; Brazma, A; Rabbie, R; ...More
PUBLISHED: 2021, SOURCE: NATURE COMMUNICATIONS, VOLUME: 12, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 6
IN MY: ORCID
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