21
TITLE: Towards a Multivariate Analysis of Genome-Scale Metabolic Models Derived from the BiGG Models Database
AUTHORS: Oliveira, Alexandre; Cunha, Emanuel; Cruz, Fernando; Capela, Joao; Sequeira, Joao; Sampaio, Marta; Dias, Oscar ;
PUBLISHED: 2022, SOURCE: 15th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, PACBB 2021, VOLUME: 325
INDEXED IN: Scopus WOS CrossRef: 1
22
TITLE: A kinetic model of the central carbon metabolism for acrylic acid production in Escherichia coli  Full Text
AUTHORS: Oliveira, A; Rodrigues, J; Ferreira, EC ; Rodrigues, L ; Dias, O ;
PUBLISHED: 2021, SOURCE: PLOS COMPUTATIONAL BIOLOGY, VOLUME: 17, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef: 13
23
TITLE: Enhancing acetic acid and 5-hydroxymethyl furfural tolerance of C. saccharoperbutylacetonicum through adaptive laboratory evolution  Full Text
AUTHORS: Alves, RF; Zetty Arenas, AM; Demirci, H; Dias, O ; Rocha, I; Basso, TO; Freitas, S;
PUBLISHED: 2021, SOURCE: PROCESS BIOCHEMISTRY, VOLUME: 101
INDEXED IN: Scopus WOS CrossRef: 10
24
TITLE: Insights into the genome architecture and evolution of Shiga toxin encoding bacteriophages of Escherichia coli
AUTHORS: Pinto, G; Sampaio, M; Dias, O ; Almeida, C; Azeredo, J; Oliveira, H;
PUBLISHED: 2021, SOURCE: BMC GENOMICS, VOLUME: 22, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 17
25
TITLE: OrtSuite – from genomes to prediction of microbial interactions within targeted ecosystem processes
AUTHORS: João Pedro Saraiva; Alexandre Bartholomäus; René Kallies; Marta Gomes; Marcos Bicalho; Carsten Vogt; Antonis Chatzinotas; Peter Stadler; Oscar Dias ; Ulisses Nunes da Rocha;
PUBLISHED: 2021
INDEXED IN: CrossRef
26
TITLE: OrtSuite: From genomes to prediction of microbial interactions within targeted ecosystem processes
AUTHORS: Saraiva, JP; Bartholomäus, A; Kallies, R; Gomes, M; Bicalho, M; Kasmanas, JC; Vogt, C; Chatzinotas, A; Stadler, P; Dias, O ; da Rocha, UN;
PUBLISHED: 2021, SOURCE: Life Science Alliance, VOLUME: 4, ISSUE: 12
INDEXED IN: Scopus CrossRef: 4
27
TITLE: Reconciliation of Regulatory Data: The Regulatory Networks of Escherichia coli and Bacillus subtilis
AUTHORS: Lima, D; Cruz, F; Rocha, M ; Dias, O ;
PUBLISHED: 2021, SOURCE: 14th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2020 in Advances in Intelligent Systems and Computing, VOLUME: 1240 AISC
INDEXED IN: Scopus CrossRef Handle
28
TITLE: The first multi-tissue diel genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber
AUTHORS: Emanuel Cunha; Miguel Silva; Ines Chaves; Huseyin Demirci; Davide Rafael Lagoa; Diogo Lima; Miguel Rocha; Isabel Rocha; Oscar Dias ;
PUBLISHED: 2021
INDEXED IN: CrossRef: 2
29
TITLE: Towards the Reconstruction of the Genome-Scale Metabolic Model of Lactobacillus acidophilus La-14
AUTHORS: Cunha, E; Zeidan, A; Dias, O ;
PUBLISHED: 2021, SOURCE: 14th International Conference on Practical Applications of Computational Biology and Bioinformatics, PACBB 2020 in Advances in Intelligent Systems and Computing, VOLUME: 1240 AISC
INDEXED IN: Scopus CrossRef
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