51
TITLE: SamPler - a novel method for selecting parameters for gene functional annotation routines  Full Text
AUTHORS: Cruz, F; Lagoa, D; Mendes, J; Rocha, I; Ferreira, EC ; Rocha, M ; Dias, O ;
PUBLISHED: 2019, SOURCE: BMC BIOINFORMATICS, VOLUME: 20, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 4
52
TITLE: Staphylococci phages display vast genomic diversity and evolutionary relationships  Full Text
AUTHORS: Oliveira, H; Sampaio, M; Melo, LDR; Dias, O ; Pope, WH; Hatfull, GF; Azeredo, J ;
PUBLISHED: 2019, SOURCE: BMC GENOMICS, VOLUME: 20, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 52
53
TITLE: Quantitative physiology and elemental composition of Kluyveromyces lactis CBS 2359 during growth on glucose at different specific growth rates  Full Text
AUTHORS: Dias, O ; Basso, TO; Rocha, I; Ferreira, EC ; Gombert, AK;
PUBLISHED: 2018, SOURCE: ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, VOLUME: 111, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 3
54
TITLE: Reconstructing high-quality large-scale metabolic models with merlin
AUTHORS: Dias, O ; Rocha, M ; Ferreira, EC ; Rocha, I;
PUBLISHED: 2018, SOURCE: Methods in Molecular Biology, VOLUME: 1716
INDEXED IN: Scopus CrossRef: 7
55
TITLE: Genome-Wide Semi-Automated Annotation of Transporter Systems  Full Text
AUTHORS: Dias, O ; Gomes, D; Vilaca, P; Cardoso, J; Rocha, M ; Ferreira, EC ; Rocha, I;
PUBLISHED: 2017, SOURCE: IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, VOLUME: 14, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 9
56
TITLE: Reconstructing genome-scale metabolic models with merlin  Full Text
AUTHORS: Oscar Dias ; Miguel Rocha ; Eugenio C Ferreira ; Isabel Rocha;
PUBLISHED: 2015, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 43, ISSUE: 8
INDEXED IN: Scopus WOS CrossRef: 95
58
TITLE: iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactis  Full Text
AUTHORS: Oscar Dias ; Rui Pereira; Andreas K Gombert; Eugenio C Ferreira ; Isabel Rocha;
PUBLISHED: 2014, SOURCE: BIOTECHNOLOGY JOURNAL, VOLUME: 9, ISSUE: 6
INDEXED IN: Scopus WOS CrossRef
59
TITLE: Metagenomic Analysis of the Saliva Microbiome with Merlin
AUTHORS: Pedro Barbosa; Oscar Dias ; Joel P Arrais ; Miguel Rocha ;
PUBLISHED: 2014, SOURCE: 8th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB) in 8TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS (PACBB 2014), VOLUME: 294, ISSUE: AISC
INDEXED IN: Scopus WOS CrossRef: 1
60
TITLE: Genome-wide metabolic (re-) annotation of Kluyveromyces lactis  Full Text
AUTHORS: Dias, O ; Gombert, AK; Ferreira, EC ; Rocha, I ;
PUBLISHED: 2012, SOURCE: BMC Genomics, VOLUME: 13, ISSUE: 1
INDEXED IN: Scopus CrossRef
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