Pedro Gabriel Dias Ferreira


AuthID: R-000-ERJ

Confirmed Publications: 81



21
TITLE: A vast resource of allelic expression data spanning human tissues
AUTHORS: Stephane E Castel; François Aguet; François Aguet; François Aguet; Pejman Mohammadi; Pejman Mohammadi; Shankara Anand; Shankara Anand; Kristin G Ardlie; Kristin G Ardlie; Stacey Gabriel; Gad A Getz; Aaron Graubert; Aaron Graubert; Kane Hadley; Kane Hadley; Robert E Handsaker; Robert E Handsaker; Katherine H Huang; Seva Kashin; Seva Kashin; Xiao Li; Daniel G MacArthur; Samuel R Meier; Samuel R Meier; Jared L Nedzel; Jared L Nedzel; Duyen T Nguyen; Ayellet V Segrè; Ellen Todres; Ellen Todres; Brunilda Balliu; Alvaro N Barbeira; Alexis Battle; Rodrigo Bonazzola; Andrew Brown; Christopher D Brown; Stephane E Castel; Donald F Conrad; Daniel J Cotter; Nancy Cox; Sayantan Das; Olivia M De Goede; Emmanouil T Dermitzakis; Jonah Einson; Barbara E Engelhardt; Eleazar Eskin; Tiffany Y Eulalio; Nicole M Ferraro; Elise D Flynn; Laure Fresard; Eric R Gamazon; Diego Garrido Martín; Nicole R Gay; Michael J Gloudemans; Roderic Guigó; Andrew R Hame; Yuan He; Paul J Hoffman; Farhad Hormozdiari; Lei Hou; Katherine H Huang; Hae Kyung Im; Brian Jo; Silva Kasela; Manolis Kellis; Sarah Kim Hellmuth; Alan Kwong; Tuuli Lappalainen; Xiao Li; Xin Li; Yanyu Liang; Serghei Mangul; Stephen B Montgomery; Manuel Muñoz Aguirre; Daniel C Nachun; Duyen T Nguyen; Andrew B Nobel; Meritxell Oliva; Yo Son Park; Yongjin Park; Princy Parsana; Abhiram S Rao; Ferran Reverter; John M Rouhana; Chiara Sabatti; Ashis Saha; Ayellet V Segrè; Andrew D Skol; Matthew Stephens; Barbara E Stranger; Benjamin J Strober; Nicole A Teran; Ana Viñuela; Gao Wang; Xiaoquan Wen; Fred Wright; Valentin Wucher; Yuxin Zou; Pedro G Ferreira ; ...More
PUBLISHED: 2020, SOURCE: Genome Biology, VOLUME: 21, ISSUE: 1
INDEXED IN: Scopus
22
TITLE: Gender Differential Transcriptome in Gastric and Thyroid Cancers  Full Text
AUTHORS: Abel Sousa; Marta Ferreira; Carla Oliveira; Pedro G Ferreira ;
PUBLISHED: 2020, SOURCE: FRONTIERS IN GENETICS, VOLUME: 11
INDEXED IN: Scopus WOS CrossRef: 10
IN MY: ORCID | CIÊNCIAVITAE
23
24
TITLE: Predicting Gastric Cancer Molecular Subtypes from Gene Expression Data  Full Text
AUTHORS: Marta Moreno ; Abel Sousa; Marta Melé; Rui Oliveira; Pedro G Ferreira ;
PUBLISHED: 2020, SOURCE: Proceedings, VOLUME: 54, ISSUE: 1
INDEXED IN: CrossRef: 1 Unpaywall
IN MY: ORCID | CIÊNCIAVITAE
25
TITLE: The GTEx Consortium atlas of genetic regulatory effects across human tissues
AUTHORS: The GTEx Consortium; Pedro Gabriel Dias Ferreira ;
PUBLISHED: 2020, SOURCE: SCIENCE, VOLUME: 369, ISSUE: 6509
INDEXED IN: Scopus WOS CrossRef: 4452
IN MY: ORCID | CIÊNCIAVITAE
26
TITLE: Transcriptomic signatures across human tissues identify functional rare genetic variation
AUTHORS: Aguet, F; Barbeira, AN; Bonazzola, R; Brown, A; Castel, SE; Jo, B; Kasela, S; Kim Hellmuth, S; Liang, Y; Oliva, M; Flynn, ED; Parsana, P; Fresard, L; Gamazon, ER; Hamel, AR; He, Y; Hormozdiari, F; Mohammadi, P; Muñoz Aguirre, M; Park, Y; Saha, A; Segrè, AV; Strober, BJ; Wen, X; Wucher, V; Ardlie, KG; Battle, A; Brown, CD; Cox, N; Das, S; Dermitzakis, ET; Engelhardt, BE; Garrido Martín, D; Gay, NR; Getz, GA; Guigó, R; Handsaker, RE; Hoffman, PJ; Im, HK; Kashin, S; Kwong, A; Lappalainen, T; Li, X; MacArthur, DG; Montgomery, SB; Rouhana, JM; Stephens, M; Stranger, BE; Todres, E; Viñuela, A; Wang, G; Zou, Y; Anand, S; Gabriel, S; Graubert, A; Hadley, K; Huang, KH; Meier, SR; Nedzel, JL; Nguyen, DT; Balliu, B; Conrad, DF; Cotter, DJ; deGoede, OM; Einson, J; Eskin, E; Eulalio, TY; Ferraro, NM; Gloudemans, MJ; Hou, L; Kellis, M; Li, X; Mangul, S; Nachun, DC; Nobel, AB; Park, Y; Rao, AS; Reverter, F; Sabatti, C; Skol, AD; Teran, NA; Wright, F; Ferreira, PG ; Li, G; Melé, M; Yeger Lotem, E; Barcus, ME; Bradbury, D; Krubit, T; McLean, JA; Qi, L; Robinson, K; Roche, NV; Smith, AM; Sobin, L; Tabor, DE; Undale, A; Bridge, J; Brigham, LE; Foster, BA; Gillard, BM; Hasz, R; Hunter, M; Johns, C; Johnson, M; Karasik, E; Kopen, G; Leinweber, WF; McDonald, A; Moser, MT; Myer, K; Ramsey, KD; Roe, B; Shad, S; Thomas, JA; Walters, G; Washington, M; Wheeler, J; Jewell, SD; Rohrer, DC; Valley, DR; Davis, DA; Mash, DC; Branton, PA; Barker, LK; Gardiner, HM; Mosavel, M; Siminoff, LA; Flicek, P; Haeussler, M; Juettemann, T; Kent, WJ; Lee, CM; Powell, CC; Rosenbloom, KR; Ruffier, M; Sheppard, D; Taylor, K; Trevanion, SJ; Zerbino, DR; Abell, NS; Akey, J; Chen, L; Demanelis, K; Doherty, JA; Feinberg, AP; Hansen, KD; Hickey, PF; Jasmine, F; Jiang, L; Kaul, R; Kibriya, MG; Li, JB; Li, Q; Lin, S; Linder, SE; Pierce, BL; Rizzardi, LF; Smith, KS; Snyder, M; Stamatoyannopoulos, J; Tang, H; Wang, M; Carithers, LJ; Guan, P; Koester, SE; Little, AR; Moore, HM; Nierras, CR; Rao, AK; Vaught, JB; Volpi, S; ...More
PUBLISHED: 2020, SOURCE: Science, VOLUME: 369, ISSUE: 6509
INDEXED IN: Scopus CrossRef: 130
27
TITLE: Bioinformatics algorithms: Design and implementation in python
AUTHORS: Rocha, M ; Ferreira, PG ;
PUBLISHED: 2018, SOURCE: Bioinformatics Algorithms: Design and Implementation in Python
INDEXED IN: Scopus
28
TITLE: Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics
AUTHORS: Barbeira, AN; Dickinson, SP; Bonazzola, R; Zheng, J; Wheeler, HE; Torres, JM; Torstenson, ES; Shah, KP; Garcia, T; Edwards, TL; Stahl, EA; Huckins, LM; Aguet, F; Ardlie, KG; Cummings, BB; Gelfand, ET; Getz, G; Hadley, K; Handsaker, RE; Huang, KH; Kashin, S; Karczewski, KJ; Lek, M; Li, X; MacArthur, DG; Nedzel, JL; Nguyen, DT; Noble, MS; Segrè, AV; Trowbridge, CA; Tukiainen, T; Abell, NS; Balliu, B; Barshir, R; Basha, O; Battle, A; Bogu, GK; Brown, A; Brown, CD; Castel, SE; Chen, LS; Chiang, C; Conrad, DF; Damani, FN; Davis, JR; Delaneau, O; Dermitzakis, ET; Engelhardt, BE; Eskin, E; Ferreira, PG ; Frésard, L; Gamazon, ER; Garrido Martín, D; Gewirtz, ADH; Gliner, G; Gloudemans, MJ; Guigo, R; Hall, IM; Han, B; He, Y; Hormozdiari, F; Howald, C; Jo, B; Kang, EY; Kim, Y; Kim Hellmuth, S; Lappalainen, T; Li, G; Li, X; Liu, B; Mangul, S; McCarthy, MI; McDowell, IC; Mohammadi, P; Monlong, J; Montgomery, SB; Muñoz Aguirre, M; Ndungu, AW; Nobel, AB; Oliva, M; Ongen, H; Palowitch, JJ; Panousis, N; Papasaikas, P; Park, Y; Parsana, P; Payne, AJ; Peterson, CB; Quan, J; Reverter, F; Sabatti, C; Saha, A; Sammeth, M; Scott, AJ; Shabalin, AA; Sodaei, R; Stephens, M; Stranger, BE; Strober, BJ; Sul, JH; Tsang, EK; Urbut, S; Van De Bunt, M; Wang, G; Wen, X; Wright, FA; Xi, HS; Yeger Lotem, E; Zappala, Z; Zaugg, JB; Zhou, YH; Akey, JM; Bates, D; Chan, J; Claussnitzer, M; Demanelis, K; Diegel, M; Doherty, JA; Feinberg, AP; Fernando, MS; Halow, J; Hansen, KD; Haugen, E; Hickey, PF; Hou, L; Jasmine, F; Jian, R; Jiang, L; Johnson, A; Kaul, R; Kellis, M; Kibriya, MG; Lee, K; Li, JB; Li, Q; Lin, J; Lin, S; Linder, S; Linke, C; Liu, Y; Maurano, MT; Molinie, B; Nelson, J; Neri, FJ; Park, Y; Pierce, BL; Rinaldi, NJ; Rizzardi, LF; Sandstrom, R; Skol, A; Smith, KS; Snyder, MP; Stamatoyannopoulos, J; Tang, H; Wang, L; Wang, M; Van Wittenberghe, N; Wu, F; Zhang, R; Nierras, CR; Branton, PA; Carithers, LJ; Guan, P; Moore, HM; Rao, A; Vaught, JB; Gould, SE; Lockart, NC; Martin, C; Struewing, JP; Volpi, S; Addington, AM; Koester, SE; Little, AR; Brigham, LE; Hasz, R; Hunter, M; Johns, C; Johnson, M; Kopen, G; Leinweber, WF; Lonsdale, JT; McDonald, A; Mestichelli, B; Myer, K; Roe, B; Salvatore, M; Shad, S; Thomas, JA; Walters, G; Washington, M; Wheeler, J; Bridge, J; Foster, BA; Gillard, BM; Karasik, E; Kumar, R; Miklos, M; Moser, MT; Jewell, SD; Montroy, RG; Rohrer, DC; Valley, DR; Davis, DA; Mash, DC; Undale, AH; Smith, AM; Tabor, DE; Roche, NV; McLean, JA; Vatanian, N; Robinson, KL; Sobin, L; Barcus, ME; Valentino, KM; Qi, L; Hunter, S; Hariharan, P; Singh, S; Um, KS; Matose, T; Tomaszewski, MM; Barker, LK; Mosavel, M; Siminoff, LA; Traino, HM; Flicek, P; Juettemann, T; Ruffier, M; Sheppard, D; Taylor, K; Trevanion, SJ; Zerbino, DR; Craft, B; Goldman, M; Haeussler, M; Kent, WJ; Lee, CM; Paten, B; Rosenbloom, KR; Vivian, J; Zhu, J; Nicolae, DL; Cox, NJ; Im, HK; ...More
PUBLISHED: 2018, SOURCE: Nature Communications, VOLUME: 9, ISSUE: 1
INDEXED IN: Scopus
29
TITLE: The effects of death and post-mortem cold ischemia on human tissue transcriptomes
AUTHORS: Pedro G Ferreira ; Manuel Munoz Aguirre; Ferran Reverter; Caio P S Sa Godinho; Abel Sousa; Alicia Amadoz; Reza Sodaei; Marta R Hidalgo; Dmitri Pervouchine; Jose Carbonell Caballero; Ramil Nurtdinov; Alessandra Breschi; Raziel Amador; Patricia Oliveira; Cankut Cubuk; Joao Curado; Francois Aguet; Carla Oliveira; Joaquin Dopazo; Michael Sammeth; Kristin G Ardlie; Roderic Guigo; ...More
PUBLISHED: 2018, SOURCE: NATURE COMMUNICATIONS, VOLUME: 9, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 261
IN MY: ORCID | CIÊNCIAVITAE
30
TITLE: Co-expression networks reveal the tissue-specific regulation of transcription and splicing
AUTHORS: Ashis Saha; Yungil Kim; Ariel D H Gewirtz; Brian Jo; Chuan Gao; Ian C McDowell; Barbara E Engelhardt; Alexis Battle; François Aguet; Kristin G Ardlie; Beryl B Cummings; Ellen T Gelfand; Gad Getz; Kane Hadley; Robert E Handsaker; Katherine H Huang; Seva Kashin; Konrad J Karczewski; Monkol Lek; Xiao Li; Daniel G MacArthur; Jared L Nedzel; Duyen T Nguyen; Michael S Noble; Ayellet V Segrè; Casandra A Trowbridge; Taru Tukiainen; Nathan S Abell; Brunilda Balliu; Ruth Barshir; Omer Basha; Alexis Battle; Gireesh K Bogu; Andrew Brown; Christopher D Brown; Stephane E Castel; Lin S Chen; Colby Chiang; Donald F Conrad; Nancy J Cox; Farhan N Damani; Joe R Davis; Olivier Delaneau; Emmanouil T Dermitzakis; Barbara E Engelhardt; Eleazar Eskin; Pedro G Ferreira ; Laure Frésard; Eric R Gamazon; Diego Garrido Martín; Genna Gliner; Michael J Gloudemans; Roderic Guigo; Ira M Hall; Buhm Han; Yuan He; Farhad Hormozdiari; Cedric Howald; Hae Kyung Im; Eun Yong Kang; Sarah Kim Hellmuth; Tuuli Lappalainen; Gen Li; Xin Li; Boxiang Liu; Serghei Mangul; Mark I McCarthy; Pejman Mohammadi; Jean Monlong; Stephen B Montgomery; Manuel Muñoz Aguirre; Anne W Ndungu; Dan L Nicolae; Andrew B Nobel; Meritxell Oliva; Halit Ongen; John J Palowitch; Nikolaos Panousis; Panagiotis Papasaikas; Yo Son Park; Princy Parsana; Anthony J Payne; Christine B Peterson; Jie Quan; Ferran Reverter; Chiara Sabatti; Michael Sammeth; Alexandra J Scott; Andrey A Shabalin; Reza Sodaei; Matthew Stephens; Barbara E Stranger; Benjamin J Strober; Jae Hoon Sul; Emily K Tsang; Sarah Urbut; Martijn van de Bunt; Gao Wang; Xiaoquan Wen; Fred A Wright; ...More
PUBLISHED: 2017, SOURCE: Genome Research, VOLUME: 27, ISSUE: 11
INDEXED IN: Scopus
Page 3 of 9. Total results: 81.

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