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TITLE: Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species  Full Text
AUTHORS: Keith R Bradnam; Joseph N Fass; Anton Alexandrov; Paul Baranay; Michael Bechner; Inanc Birol; Sebastien Boisvert; Jarrod A Chapman; Guillaume Chapuis; Rayan Chikhi; Hamidreza Chitsaz; Wen Chi Chou; Jacques Corbeil; Cristian Del Fabbro; Roderick R Docking; Richard Durbin; Dent Earl; Scott Emrich; Pavel Fedotov; Nuno A Fonseca ; Ganeshkumar Ganapathy; Richard A Gibbs; Sante Gnerre; Elenie Godzaridis; Steve Goldstein; Matthias Haimel; Giles Hall; David Haussler; Joseph B Hiatt; Isaac Y Ho; Jason Howard; Martin Hunt; Shaun D Jackman; David B Jaffe; Erich D Jarvis; Huaiyang Jiang; Sergey Kazakov; Paul J Kersey; Jacob O Kitzman; James R Knight; Sergey Koren; Tak Wah Lam; Dominique Lavenier; Francois Laviolette; Yingrui R Li; Zhenyu Y Li; Binghang H Liu; Yue Liu; Ruibang Luo; Iain MacCallum; Matthew D MacManes; Nicolas Maillet; Sergey Melnikov; Delphine Naquin; Zemin Ning; Thomas D Otto; Benedict Paten; Octavio S Paulo; Adam M Phillippy; Francisco Pina Martins; Michael Place; Dariusz Przybylski; Xiang Qin; Carson Qu; Filipe J Ribeiro; Stephen Richards; Daniel S Rokhsar; Graham G Ruby; Simone Scalabrin; Michael C Schatz; David C Schwartz; Alexey Sergushichev; Ted Sharpe; Timothy I Shaw; Jay Shendure; Yujian J Shi; Jared T Simpson; Henry Song; Fedor Tsarev; Francesco Vezzi; Riccardo Vicedomini; Bruno M Vieira; Jun Wang; Kim C Worley; Shuangye Y Yin; Siu Ming Yiu; Jianying Y Yuan; Guojie J Zhang; Hao Zhang; Shiguo Zhou; Ian F Korf; ...More
PUBLISHED: 2013, SOURCE: GIGASCIENCE, VOLUME: 2, ISSUE: 1
INDEXED IN: Scopus WOS CrossRef: 518
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TITLE: Assemblathon 1: A competitive assessment of de novo short read assembly methods
AUTHORS: Dent Earl; Keith Bradnam; John St John; Aaron Darling; Dawei W Lin; Joseph Fass; Hung, OKY; Vince Buffalo; Daniel R Zerbino; Mark Diekhans; Nguyen, N; Pramila Nuwantha Ariyaratne; Wing Kin Sung; Zemin M Ning; Matthias Haimel; Jared T Simpson; Nuno A Fonseca ; Inanc Birol; Roderick R Docking; Isaac Y Ho; Daniel S Rokhsar; Rayan Chikhi; Dominique Lavenier; Guillaume Chapuis; Delphine Naquin; Nicolas Maillet; Michael C Schatz; David R Kelley; Adam M Phillippy; Sergey Koren; Shiaw Pyng Yang; Wei Wu; Wen Chi Chou; Anuj Srivastava; Timothy I Shaw; Graham G Ruby; Peter Skewes Cox; Miguel Betegon; Michelle T Dimon; Victor Solovyev; Igor Seledtsov; Petr Kosarev; Denis Vorobyev; Ricardo Ramirez Gonzalez; Richard Leggett; Dan MacLean; Fangfang F Xia; Ruibang B Luo; Zhenyu Y Li; Yinlong L Xie; Binghang H Liu; Sante Gnerre; Iain MacCallum; Dariusz Przybylski; Filipe J Ribeiro; Shuangye Y Yin; Ted Sharpe; Giles Hall; Paul J Kersey; Richard Durbin; Shaun D Jackman; Jarrod A Chapman; Xiaoqiu Q Huang; Joseph L DeRisi; Mario Caccamo; Yingrui R Li; David B Jaffe; Richard E Green; David Haussler; Ian Korf; Benedict Paten; ...More
PUBLISHED: 2011, SOURCE: GENOME RESEARCH, VOLUME: 21, ISSUE: 12
INDEXED IN: Scopus WOS CrossRef: 387
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TITLE: Genome 10K: A Proposal to Obtain Whole-Genome Sequence for 10 000 Vertebrate Species
AUTHORS: Haussler, D; O'Brien, SJ; Ryder, OA; Keith Barker, F; Clamp, M; Crawford, AJ; Hanner, R; Hanotte, O; Johnson, WE; McGuire, JA; Miller, W; Murphy, RW; Murphy, WJ; Sheldon, FH; Sinervo, B; Venkatesh, B; Wiley, EO; Allendorf, FW; Amato, G; Scott Baker, C; Bauer, A; Beja-Pereira, A or Pereira, A or Genome 10K Community Scientists, ; Bermingham, E; Bernardi, G; Bonvicino, CR; Brenner, S; Burke, T; Cracraft, J; Diekhans, M; Edwards, S; Ericson, PGP; Estes, J; Fjelsda, J; Flesness, N; Gamble, T; Gaubert, P; Graphodatsky, AS; Marshall Graves, JA; Green, ED; Green, RE; Hackett, S; Hebert, P; Helgen, KM; Joseph, L; Kessing, B; Kingsley, DM; Lewin, HA; Luikart, G; Martelli, P; Moreira, MAM; Nguyen, N; Orti, G; Pike, BL; Rawson, DM; Schuster, SC; Seuanez, HN; Bradley Shaffer, H; Springer, MS; Stuart, JM; Sumner, J; Teeling, E; Vrijenhoek, RC; Ward, RD; Warren, WC; Wayne, R; Williams, TM; Wolfe, ND; Zhang, YP; Graves, J; Graphodatsky, A; Springer, M; Williams, T; Wolfe, N; Edwards, SV; Orti, G; Rawson, DM; Felsenfeld, A; Seuanez, HN; Stuart, JM; Turner, S; ...More
PUBLISHED: 2009, SOURCE: JOURNAL OF HEREDITY, VOLUME: 100, ISSUE: 6
INDEXED IN: Scopus WOS