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TITLE: Spatial genetic structure of European wild boar, with inferences on late-Pleistocene and Holocene demographic history  Full Text
AUTHORS: de Jong, Joost F. F.; Iacolina, Laura; Prins, Herbert H. T.; van Hooft, Pim; Crooijmans, Richard P. M. A.; van Wieren, Sip E. E.; Banos, Joaquin Vicente; Baubet, Eric; Cahill, Sean; Ferreira, Eduardo; Fonseca, Carlos; Glazov, Peter M. M.; Turinek, Ida Jelenko; Martin, Victor M. Lizana M.; Nahlik, Andras; Pokorny, Bostjan; Podgorski, Tomasz; Sprem, Nikica; Veeroja, Rauno; Ydenberg, Ronald C. C.; Megens, Hendrik Jan; ...More
PUBLISHED: 2023, SOURCE: HEREDITY
INDEXED IN: Scopus WOS
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TITLE: Integrative QTL mapping and selection signatures in Groningen White Headed cattle inferred from whole-genome sequences  Full Text
AUTHORS: Gonzalez Prendes, Rayner; Ginja, Catarina ; Kantanen, Juha; Ghanem, Nasser; Kugonza, Donald R.; Makgahlela, Mahlako L.; Groenen, Martien A. M.; Crooijmans, Richard P. M. A.;
PUBLISHED: 2022, SOURCE: PLOS ONE, VOLUME: 17, ISSUE: 10
INDEXED IN: Scopus WOS
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TITLE: Distribution and Functionality of Copy Number Variation across European Cattle Populations  Full Text
AUTHORS: Maulik Upadhyay; Vinicus H da Silva; Hendrik Jan Megens; Marleen H P W Visker; Paolo Ajmone Marsan; Valentin A Balteanu; Susana Dunner; Jose F Garcia; Catarina Ginja ; Juha Kantanen; Martien A M Groenen; Richard P M A Crooijmans;
PUBLISHED: 2017, SOURCE: FRONTIERS IN GENETICS, VOLUME: 8, ISSUE: AUG
INDEXED IN: Scopus WOS
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TITLE: Genome-wide SNP data unveils the globalization of domesticated pigs  Full Text
AUTHORS: Bin Yang; Leilei L Cui; Miguel Perez Enciso; Aleksei Traspov; Richard P M A Crooijmans; Natalia Zinovieva; Lawrence B Schook; Alan Archibald; Kesinee Gatphayak; Christophe Knorr; Alex Triantafyllidis; Panoraia Alexandri; Gono Semiadi; Olivier Hanotte; Deodalia Dias; Peter Dovc; Pekka Uimari; Laura Iacolina; Massimo Scandura; Martien A M Groenen; Lusheng S Huang; Hendrik Jan Megens; ...More
PUBLISHED: 2017, SOURCE: GENETICS SELECTION EVOLUTION, VOLUME: 49, ISSUE: 1
INDEXED IN: Scopus WOS
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TITLE: Genetic origin, admixture and population history of aurochs (Bos primigenius) and primitive European cattle  Full Text
AUTHORS: Upadhyay, MR; Chen, W; Lenstra, JA; Goderie, CRJ; MacHugh, DE; Park, SDE; Magee, DA; Matassino, D; Ciani, F; Megens, HJ; van Arendonk, JAM; Groenen, MAM; Crooijmans, RPMA; Marsan, PA; Balteanu, V; Dunner, S; Garcia, JF; Ginja, C ; Kantanen, J;
PUBLISHED: 2017, SOURCE: HEREDITY, VOLUME: 118, ISSUE: 2
INDEXED IN: Scopus WOS
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TITLE: Evolutionary signals of selection on cognition from the great tit genome and methylome
AUTHORS: Laine, VN; Gossmann, TI; Schachtschneider, KM; Garroway, CJ; Madsen, O; Verhoeven, KJF; De Jager, V; Megens, HJ; Warren, WC; Minx, P; Crooijmans, RPMA; Corcoran, P; Adriaensen, F; Belda, E; Bushuev, A; Cichon, M; Charmantier, A; Dingemanse, N; Doligez, B; Eeva, T; Erikstad, KE; Fedorov, S; Hau, M; Hille, S; Hinde, C; Kempenaers, B; Kerimov, A; Krist, M; Mand, R; Matthysen, E; Nager, R; Norte, C; Orell, M; Richner, H; Slagsvold, T; Tilgar, V; Tinbergen, J; Torok, J; Tschirren, B; Yuta, T; Sheldon, BC; Slate, J; Zeng, K; Van Oers, K; Visser, ME; Groenen, MAM; ...More
PUBLISHED: 2016, SOURCE: Nature Communications, VOLUME: 7
INDEXED IN: Scopus CrossRef
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TITLE: Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA  Full Text
AUTHORS: Amaral, AJ; Ferretti, L; Megens, HJ; Crooijmans, RPMA; Nie, H; Ramos Onsins, SE; Perez Enciso, M; Schook, LB; Groenen, MAM;
PUBLISHED: 2011, SOURCE: PLoS ONE, VOLUME: 6, ISSUE: 4
INDEXED IN: Scopus CrossRef
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TITLE: Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology  Full Text
AUTHORS: Ramos, AM; Crooijmans, RPMA; Affara, NA; Amaral, AJ; Archibald, AL; Beever, JE; Bendixen, C; Churcher, C; Clark, R; Dehais, P; Hansen, MS; Hedegaard, J; Hu, ZL; Kerstens, HH; Law, AS; Megens, HJ; Milan, D; Nonneman, DJ; Rohrer, GA; Rothschild, MF; Smith, TPL; Schnabel, RD; Van Tassell, CP; Taylor, JF; Wiedmann, RT; Schook, LB; Groenen, MAM; ...More
PUBLISHED: 2009, SOURCE: PLoS ONE, VOLUME: 4, ISSUE: 8
INDEXED IN: Scopus CrossRef
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TITLE: Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome  Full Text
AUTHORS: Amaral, AJ; Megens, H; Kerstens, HHD; Heuven, HCM; Dibbits, B; Crooijmans, RPMA; den Dunnen, JT; Groenen, MAM;
PUBLISHED: 2009, SOURCE: BMC Genomics, VOLUME: 10, ISSUE: 1
INDEXED IN: Scopus CrossRef
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TITLE: Linkage disequilibrium decay and haplotype block structure in the pig
AUTHORS: Amaral, AJ; Megens, HJ; Crooijmans, RPMA; Heuven, HCM; Groenen, MAM;
PUBLISHED: 2008, SOURCE: Genetics, VOLUME: 179, ISSUE: 1
INDEXED IN: Scopus CrossRef