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TITLE: Host Glycan Sugar-Specific Pathways in Streptococcus pneumonia: Galactose as a Key Sugar in Colonisation and Infection  Full Text
AUTHORS: Paixao, L; Oliveira, J; Verissimo, A; Vinga, S ; Lourenco, EC; Ventura, MR; Kjos, M; Veening, JW; Fernandes, VE; Andrew, PW; Yesilkaya, H; Neves, AR;
PUBLISHED: 2015, SOURCE: PLOS ONE, VOLUME: 10, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef: 52
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TITLE: Host Glycan Sugar-Specific Pathways in Streptococcus pneumonia: Galactose as a Key Sugar in Colonisation and Infection (vol 10, e0121042, 2015)  Full Text
AUTHORS: Paixao, L; Oliveira, J; Verissimo, A; Vinga, S ; Lourenco, EC; Ventura, MR;
PUBLISHED: 2015, SOURCE: PLOS ONE, VOLUME: 10, ISSUE: 4
INDEXED IN: WOS CrossRef: 1
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TITLE: Identification of switched ARX models via convex optimization and expectation maximization  Full Text
AUTHORS: Andras Hartmann; Joao M Lemos; Rafael S Costa; Joao Xavier; Susana Vinga ;
PUBLISHED: 2015, SOURCE: JOURNAL OF PROCESS CONTROL, VOLUME: 28
INDEXED IN: Scopus WOS CrossRef: 18
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TITLE: Modeling multiple experiments using regularized optimization: A case study on bacterial glucose utilization dynamics  Full Text
AUTHORS: Andras Hartmann; Joao M Lemos; Susana Vinga ;
PUBLISHED: 2015, SOURCE: COMPUTERS IN BIOLOGY AND MEDICINE, VOLUME: 63
INDEXED IN: Scopus WOS CrossRef: 4
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TITLE: Outlier detection in cox proportional hazards models based on the concordance c-Index
AUTHORS: Pinto, JD; Carvalho, AM; Vinga, S ;
PUBLISHED: 2015, SOURCE: 1st International Workshop on Machine Learning, Optimization, and Big Data, MOD 2015 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 9432
INDEXED IN: Scopus CrossRef: 2
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TITLE: Transcriptional and metabolic effects of glucose on Streptococcus pneumoniae sugar metabolism  Full Text
AUTHORS: Paixao, L; Caldas, J; Kloosterman, TG; Kuipers, OP; Vinga, S ; Neves, AR;
PUBLISHED: 2015, SOURCE: FRONTIERS IN MICROBIOLOGY, VOLUME: 6
INDEXED IN: WOS CrossRef: 21
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TITLE: An extended dynamic model of Lactococcus lactis metabolism for mannitol and 2,3-butanediol production  Full Text
AUTHORS: Rafael S Costa; Andras Hartmann; Paula Gaspar; Ana R Neves; Susana Vinga ;
PUBLISHED: 2014, SOURCE: MOLECULAR BIOSYSTEMS, VOLUME: 10, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef: 12
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TITLE: Editorial: Alignment-free methods in computational biology  Full Text
AUTHORS: Susana Vinga ;
PUBLISHED: 2014, SOURCE: BRIEFINGS IN BIOINFORMATICS, VOLUME: 15, ISSUE: 3
INDEXED IN: Scopus WOS CrossRef: 44
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TITLE: Exploring the cellular objective in flux balance constraint-based models
AUTHORS: Costa, RS; Nguyen, S; Hartmann, A; Vinga, S ;
PUBLISHED: 2014, SOURCE: 12th International Conference on Computational Methods in Systems Biology, CMSB 2014 in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), VOLUME: 8859
INDEXED IN: Scopus
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TITLE: Global Meta-Analysis of Transcriptomics Studies  Full Text
AUTHORS: Jose Caldas; Susana Vinga ;
PUBLISHED: 2014, SOURCE: PLOS ONE, VOLUME: 9, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 10
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