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TITLE: A Computation Tool for the Estimation of Biomass Composition from Genomic and Transcriptomic Information
AUTHORS: Sophia Santos; Isabel Rocha;
PUBLISHED: 2016, SOURCE: 10th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in 10TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, VOLUME: 477
INDEXED IN: Scopus WOS CrossRef
62
TITLE: Development of an Integrated Framework for Minimal Cut Set Enumeration in Constraint-Based Models
AUTHORS: Vitor Vieira; Paulo Maia; Isabel Rocha; Miguel Rocha ;
PUBLISHED: 2016, SOURCE: 10th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB) in 10TH INTERNATIONAL CONFERENCE ON PRACTICAL APPLICATIONS OF COMPUTATIONAL BIOLOGY & BIOINFORMATICS, VOLUME: 477
INDEXED IN: Scopus WOS CrossRef: 2
63
TITLE: Yeast metabolic chassis designs for diverse biotechnological products  Full Text
AUTHORS: Paula Jouhten; Tomasz Boruta; Sergej Andrejev; Filipa Pereira; Isabel Rocha; Kiran Raosaheb Patil;
PUBLISHED: 2016, SOURCE: SCIENTIFIC REPORTS, VOLUME: 6
INDEXED IN: Scopus WOS CrossRef
64
TITLE: Current state and challenges for dynamic metabolic modeling  Full Text
AUTHORS: Eleni Vasilakou; Daniel Machado; Axel Theorell; Isabel Rocha; Katharina Noeh; Marco Oldiges; Aljoscha A Wahl;
PUBLISHED: 2016, SOURCE: CURRENT OPINION IN MICROBIOLOGY, VOLUME: 33
INDEXED IN: Scopus WOS CrossRef
65
TITLE: Stoichiometric Representation of Gene-Protein-Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction  Full Text
AUTHORS: Daniel Machado; Markus J Herrgard; Isabel Rocha;
PUBLISHED: 2016, SOURCE: PLOS COMPUTATIONAL BIOLOGY, VOLUME: 12, ISSUE: 10
INDEXED IN: Scopus WOS
66
TITLE: Estimation of biomass composition from genomic and transcriptomic information
AUTHORS: Sophia Santos; Isabel Rocha;
PUBLISHED: 2016, SOURCE: JOURNAL OF INTEGRATIVE BIOINFORMATICS, VOLUME: 13, ISSUE: 2
INDEXED IN: WOS
67
TITLE: A Comparative Analysis of Dynamic Models of the Central Carbon Metabolism of Escherichia coli
AUTHORS: Ana Patricia Lima; Vitor Baixinho; Daniel Machado; Isabel Rocha;
PUBLISHED: 2016, SOURCE: 6th IFAC Conference on Foundations of Systems Biology in Engineering (FOSBE) in IFAC PAPERSONLINE, VOLUME: 49, ISSUE: 26
INDEXED IN: WOS
68
TITLE: Development and application of efficient pathway enumeration algorithms for metabolic engineering applications  Full Text
AUTHORS: Liu, F; Vilaca, P; Rocha, I; Rocha, M ;
PUBLISHED: 2015, SOURCE: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, VOLUME: 118, ISSUE: 2
INDEXED IN: Scopus WOS CrossRef: 6
70
TITLE: Reconstructing genome-scale metabolic models with merlin  Full Text
AUTHORS: Oscar Dias; Miguel Rocha ; Eugenio C Ferreira; Isabel Rocha;
PUBLISHED: 2015, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 43, ISSUE: 8
INDEXED IN: Scopus WOS CrossRef: 95
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