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João Tiago Soares Coimbra

AuthID: R-000-TTR

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Confirmed Publications: 42

1

TITLE: Achieving a dramatic blue colour stability in anthocyanins bearing acylated sugars in position 3′,5′ Full Text
AUTHORS: Oliveira, Joana ; Coimbra, Joao T. S. ; Freitas, Victor ; Yang, Peiqing; Basilio, Nuno; Pina, Fernando;
PUBLISHED: 2025, SOURCE: CHEMICAL COMMUNICATIONS

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2

TITLE: Molecular dynamics of Lys49 PLA2-like toxins: Insights into solution and membrane-bound conformations
AUTHORS: Rachao, Rui; Coimbra, Joao T. S. ; Ramos, Maria J.; Gutierrez, Jose Maria; Lomonte, Bruno; Fernandes, Pedro A. ;
PUBLISHED: 2025, SOURCE: TOXICON, VOLUME: 267

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3

TITLE: Reaction Mechanism and Catalytic Determinants of a Highly Active De Novo Metalloesterase
AUTHORS: Teixeira, Luis M. C.; Coimbra, Joao T. S. ; Ramos, Maria J.; Hilvert, Donald; Fernandes, Pedro A. ;
PUBLISHED: 2025, SOURCE: ACS CATALYSIS, VOLUME: 15, ISSUE: 11

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4

TITLE: Crosstalk of Nucleic Acid Mimics with Lipid Membranes: A Multifaceted Computational and Experimental Study Full Text
AUTHORS: Magalhaes, Beatriz T.; Coimbra, Joao T. S. ; Silva, Raquel M.; Ferreira, Mariana ; Santos, Rita S.; Gameiro, Paula ; Azevedo, Nuno F. ; Fernandes, Pedro A. ;
PUBLISHED: 2024, SOURCE: BIOCHEMISTRY, VOLUME: 63, ISSUE: 24

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5

TITLE: Venomous Peptides: Molecular Origin of the Toxicity of Snake Venom PLA<sub>2</sub>-like Peptides
AUTHORS: Coimbra, JoaoT. S. ; Gissler, Antoine; Nitor, Emiel; Rostamipour, Kiana; Cunha, Ana V.; Ramos, Maria J. ; Fernandes, Pedro A. ;
PUBLISHED: 2024, SOURCE: JACS AU, VOLUME: 4, ISSUE: 11

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6

TITLE: Beyond the TPP<SUP>+</SUP> "gold standard": a new generation mitochondrial delivery vector based on extended PN frameworks
AUTHORS: Ong, How Chee; Coimbra, Joao T. S. ; Ramos, Maria J. ; Xing, Bengang; Fernandes, Pedro A. ; Garcia, Felipe;
PUBLISHED: 2023, SOURCE: CHEMICAL SCIENCE, VOLUME: 14, ISSUE: 15

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7

TITLE: Deciphering the Catalytic Mechanism of Virginiamycin B Lyase with Multiscale Methods and Molecular Dynamics Simulations Full Text
AUTHORS: Coimbra, Joas T. S. ; Fernandes, Pedro A. ; Ramos, Maria J. ;
PUBLISHED: 2023, SOURCE: JOURNAL OF CHEMICAL INFORMATION AND MODELING, VOLUME: 63, ISSUE: 20

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8

TITLE: Different Enzyme Conformations Induce Different Mechanistic Traits in HIV-1 Protease Full Text
AUTHORS: Coimbra, Joao T. S. ; Neves, Rui P. P. ; Cunha, Ana, V; Ramos, Maria J. ; Fernandes, Pedro A. ;
PUBLISHED: 2022, SOURCE: CHEMISTRY-A EUROPEAN JOURNAL, VOLUME: 28, ISSUE: 42

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9

TITLE: Exploring the permeation of fluoroquinolone metalloantibiotics across outer membrane porins by combining molecular dynamics simulations and a porin-mimetic in vitro model Full Text
AUTHORS: Sousa, Carla F.; Coimbra, Joao T. S. ; Richter, Robert; Morais Cabral, Joao H.; Ramos, Maria J. ; Lehr, Claus Michael; Fernandes, Pedro A. ; Gameiro, Paula ;
PUBLISHED: 2022, SOURCE: BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES, VOLUME: 1864, ISSUE: 3

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10

TITLE: Transmembrane Protease Serine 2 Proteolytic Cleavage of the SARS-CoV-2 Spike Protein: A Mechanistic Quantum Mechanics/Molecular Mechanics Study to Inspire the Design of New Drugs To Fight the COVID-19 Pandemic Full Text
AUTHORS: Teixeira, Luis M. C.; Coimbra, Joao T. S. ; Ramos, Maria Joao ; Fernandes, Pedro Alexandrino ;
PUBLISHED: 2022, SOURCE: JOURNAL OF CHEMICAL INFORMATION AND MODELING, VOLUME: 62, ISSUE: 10

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