Claudine Chaouiya
AuthID: R-000-T6V
1
TITLE: YEASTRACT plus : a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis Full Text
AUTHORS: Teixeira, Miguel Cacho; Viana, Romeu; Palma, Margarida; Oliveira, Jorge; Galocha, Monica; Mota, Marta Neves; Couceiro, Diogo; Pereira, Maria Galhardas; Antunes, Miguel; Costa, Ines, V; Pais, Pedro; Parada, Carolina; Chaouiya, Claudine; Sa Correia, Isabel; Monteiro, Pedro Tiago;
PUBLISHED: 2022, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 51, ISSUE: D1
AUTHORS: Teixeira, Miguel Cacho; Viana, Romeu; Palma, Margarida; Oliveira, Jorge; Galocha, Monica; Mota, Marta Neves; Couceiro, Diogo; Pereira, Maria Galhardas; Antunes, Miguel; Costa, Ines, V; Pais, Pedro; Parada, Carolina; Chaouiya, Claudine; Sa Correia, Isabel; Monteiro, Pedro Tiago;
PUBLISHED: 2022, SOURCE: NUCLEIC ACIDS RESEARCH, VOLUME: 51, ISSUE: D1
INDEXED IN: 
Scopus 
WOS
Scopus WOS2
TITLE: In Silico Logical Modelling to Uncover Cooperative Interactions in Cancer Full Text
AUTHORS: Selvaggio, G; Chaouiya, C; Janody, F;
PUBLISHED: 2021, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 22, ISSUE: 9
AUTHORS: Selvaggio, G; Chaouiya, C; Janody, F;
PUBLISHED: 2021, SOURCE: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, VOLUME: 22, ISSUE: 9
INDEXED IN: Scopus WOS
Scopus WOS3
TITLE: SysMod: the ISCB community for data-driven computational modelling and multi-scale analysis of biological systems Full Text
AUTHORS: Drager, A; Helikar, T; Barberis, M; Birtwistle, M; Calzone, L; Chaouiya, C; Hasenauer, J; Karr, JR; Niarakis, A; Martinez, MR; Saez Rodriguez, J; Thakar, J;
PUBLISHED: 2021, SOURCE: BIOINFORMATICS, VOLUME: 37, ISSUE: 21
AUTHORS: Drager, A; Helikar, T; Barberis, M; Birtwistle, M; Calzone, L; Chaouiya, C; Hasenauer, J; Karr, JR; Niarakis, A; Martinez, MR; Saez Rodriguez, J; Thakar, J;
PUBLISHED: 2021, SOURCE: BIOINFORMATICS, VOLUME: 37, ISSUE: 21
INDEXED IN: WOS
WOS4
TITLE: Hybrid Epithelial-Mesenchymal Phenotypes Are Controlled by Microenvironmental Factors
AUTHORS: Gianluca Selvaggio; Sara Canato; Archana Pawar; Pedro T Monteiro; Patricia S Guerreiro; Manuela Bras, MM; Florence Janody; Claudine Chaouiya;
PUBLISHED: 2020, SOURCE: CANCER RESEARCH, VOLUME: 80, ISSUE: 11
AUTHORS: Gianluca Selvaggio; Sara Canato; Archana Pawar; Pedro T Monteiro; Patricia S Guerreiro; Manuela Bras, MM; Florence Janody; Claudine Chaouiya;
PUBLISHED: 2020, SOURCE: CANCER RESEARCH, VOLUME: 80, ISSUE: 11
INDEXED IN: Scopus WOS
Scopus WOS5
TITLE: Assessing regulatory features of the current transcriptional network of Saccharomyces cerevisiae Full Text
AUTHORS: Pedro T Monteiro; Tiago Pedreira; Monica Galocha; Miguel C Teixeira; Claudine Chaouiya;
PUBLISHED: 2020, SOURCE: SCIENTIFIC REPORTS, VOLUME: 10, ISSUE: 1
AUTHORS: Pedro T Monteiro; Tiago Pedreira; Monica Galocha; Miguel C Teixeira; Claudine Chaouiya;
PUBLISHED: 2020, SOURCE: SCIENTIFIC REPORTS, VOLUME: 10, ISSUE: 1
INDEXED IN: Scopus WOS
Scopus WOS6
TITLE: Local Negative Circuits and Cyclic Attractors in Boolean Networks with at most Five Components
AUTHORS: Elisa Tonello; Etienne Farcot; Claudine Chaouiya;
PUBLISHED: 2019, SOURCE: SIAM JOURNAL ON APPLIED DYNAMICAL SYSTEMS, VOLUME: 18, ISSUE: 1
AUTHORS: Elisa Tonello; Etienne Farcot; Claudine Chaouiya;
PUBLISHED: 2019, SOURCE: SIAM JOURNAL ON APPLIED DYNAMICAL SYSTEMS, VOLUME: 18, ISSUE: 1
INDEXED IN: Scopus WOS
Scopus WOS7
TITLE: Impact of changing cell-cell communication network in models of epithelial pattern formation<bold> </bold>
AUTHORS: Pedro L Varela; Pedro T Monteiro; Claudine Chaouiya;
PUBLISHED: 2019, SOURCE: 8th Conference on Foundations of Systems Biology in Engineering (FOBSE) in IFAC PAPERSONLINE, VOLUME: 52, ISSUE: 26
AUTHORS: Pedro L Varela; Pedro T Monteiro; Claudine Chaouiya;
PUBLISHED: 2019, SOURCE: 8th Conference on Foundations of Systems Biology in Engineering (FOBSE) in IFAC PAPERSONLINE, VOLUME: 52, ISSUE: 26
INDEXED IN: Scopus WOS
Scopus WOS8
TITLE: Stable States of Boolean Regulatory Networks Composed Over Hexagonal Grids
AUTHORS: Pedro L Varela; Ines Lynce; Vasco Manquinho; Claudine Chaouiya; Pedro T Monteiro;
PUBLISHED: 2018, SOURCE: ELECTRONIC NOTES IN THEORETICAL COMPUTER SCIENCE, VOLUME: 335
AUTHORS: Pedro L Varela; Ines Lynce; Vasco Manquinho; Claudine Chaouiya; Pedro T Monteiro;
PUBLISHED: 2018, SOURCE: ELECTRONIC NOTES IN THEORETICAL COMPUTER SCIENCE, VOLUME: 335
INDEXED IN: Scopus WOS
Scopus WOS9
TITLE: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE) (vol 9, 1285, 2014) Full Text
AUTHORS: Dagmar Waltemath; Frank T Bergmann; Claudine Chaouiya; Tobias Czauderna; Padraig Gleeson; Carole Goble; Martin Golebiewski; Michael Hucka; Nick Juty; Olga Krebs; Nicolas Le Novere; Huaiyu Y Mi; Ion I Moraru; Chris J Myers; David Nickerson; Brett G Olivier; Nicolas Rodriguez; Falk Schreiber; Lucian Smith; Fengkai K Zhang; ...More
PUBLISHED: 2018, SOURCE: STANDARDS IN GENOMIC SCIENCES, VOLUME: 13
AUTHORS: Dagmar Waltemath; Frank T Bergmann; Claudine Chaouiya; Tobias Czauderna; Padraig Gleeson; Carole Goble; Martin Golebiewski; Michael Hucka; Nick Juty; Olga Krebs; Nicolas Le Novere; Huaiyu Y Mi; Ion I Moraru; Chris J Myers; David Nickerson; Brett G Olivier; Nicolas Rodriguez; Falk Schreiber; Lucian Smith; Fengkai K Zhang; ...More
PUBLISHED: 2018, SOURCE: STANDARDS IN GENOMIC SCIENCES, VOLUME: 13
INDEXED IN: WOS
WOS10
TITLE: Correction: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE) [Stand Genomic Sci., 9, 3, (2014) (1285)] DOI: 10.4056/sigs.5279417
AUTHORS: Waltemath, D; Bergmann, FT; Chaouiya, C; Czauderna, T; Gleeson, P; Goble, C; Golebiewski, M; Hucka, M; Juty, N; Krebs, O; Le Novère, N; Mi, H; Moraru, II; Myers, CJ; Nickerson, D; Olivier, BG; Rodriguez, N; Schreiber, F; Smith, L; Zhang, F; ...More
PUBLISHED: 2018, SOURCE: Standards in Genomic Sciences, VOLUME: 13, ISSUE: 1
AUTHORS: Waltemath, D; Bergmann, FT; Chaouiya, C; Czauderna, T; Gleeson, P; Goble, C; Golebiewski, M; Hucka, M; Juty, N; Krebs, O; Le Novère, N; Mi, H; Moraru, II; Myers, CJ; Nickerson, D; Olivier, BG; Rodriguez, N; Schreiber, F; Smith, L; Zhang, F; ...More
PUBLISHED: 2018, SOURCE: Standards in Genomic Sciences, VOLUME: 13, ISSUE: 1
INDEXED IN: Scopus
Scopus